Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RNU6-928P-201ENST00000516876 104 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 RNA5SP337-201ENST00000517007 109 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 MIR4738-201ENST00000579134 87 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 SEPT7P9-203ENST00000604116 343 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AL161729.4-201ENST00000604650 476 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 RNU1-30P-201ENST00000606575 163 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AL451064.1-201ENST00000607718 471 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AP001506.1-201ENST00000615444 211 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 AC007656.2-201ENST00000624902 4547 ntBASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HERPUD2Q9BSE4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 Y_RNA.77-201ENST00000362962 107 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 RNY1P12-201ENST00000364251 105 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 RNY4P34-201ENST00000364779 95 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 SNORD116-9-201ENST00000384000 95 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 SNORD116-3-201ENST00000384287 95 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 SNORD116-7-201ENST00000384404 95 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 SNORD116-5-201ENST00000384462 95 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 RNA5SP424-201ENST00000390988 115 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 ELOCP4-201ENST00000420090 333 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 RPL23AP82-202ENST00000427528 469 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 ARF4P2-201ENST00000430209 526 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 AC007389.2-201ENST00000434630 306 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 PGBD4P3-201ENST00000440731 581 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 AC034236.1-201ENST00000469891 373 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 NDUFB4P2-201ENST00000509515 391 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 ARL2BPP2-201ENST00000550907 489 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 BNIP3P33-201ENST00000598912 569 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 AC073544.2-201ENST00000601155 540 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 AC131902.3-201ENST00000611767 581 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 AC073308.1-201ENST00000623696 305 ntBASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.84□□□□□ -1.79
HERPUD2Q9BSE4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.84□□□□□ -1.8
HERPUD2Q9BSE4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HERPUD2Q9BSE4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HERPUD2Q9BSE4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC233263.6-201ENST00000631132 1963 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 RNA5SP42-201ENST00000364278 115 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 RNA5SP252-201ENST00000391131 119 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 RPL23AP32-201ENST00000395315 459 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 RNU2-36P-201ENST00000410361 191 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 RPL30P2-201ENST00000414021 291 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 HMGB3P20-201ENST00000417997 600 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC092047.1-201ENST00000424997 240 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 BNIP3P2-201ENST00000441221 577 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC006480.1-201ENST00000449887 378 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 MTND1P27-201ENST00000451117 902 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 snoU13.28-201ENST00000459235 104 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 SNORD42A-201ENST00000459584 64 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC023598.1-201ENST00000472521 361 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 SAP18P1-201ENST00000512058 390 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 RNU2-46P-201ENST00000517038 113 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 RNA5SP290-201ENST00000517133 127 ntBASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.83□□□□□ -1.8
HERPUD2Q9BSE4 AC006960.3-201ENST00000561845 705 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms