Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AC068790.5-201ENST00000602741 355 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AC012507.3-201ENST00000603556 477 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 Z84480.1-201ENST00000605131 311 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 AL136363.1-201ENST00000605349 337 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 TUG1_2.1-201ENST00000614234 87 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PAAF1Q9BRP4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 BDP1P-201ENST00000582658 1990 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 OR4G2P-201ENST00000328113 903 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 RNU4-35P-201ENST00000362588 141 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 RNA5SP72-201ENST00000364442 117 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 RNU4-12P-201ENST00000365233 139 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 GPR143P-201ENST00000434155 205 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 Z99127.3-201ENST00000448158 395 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AL162389.1-201ENST00000449233 177 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AP000926.1-201ENST00000479573 241 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC069499.1-201ENST00000489433 509 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AP001893.2-201ENST00000526949 202 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC123904.3-201ENST00000547218 814 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 MIR3200-201ENST00000580767 85 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC008638.3-201ENST00000603341 463 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC006077.1-201ENST00000604746 343 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 RBM11P1-201ENST00000604951 799 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC004067.1-201ENST00000608733 700 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 FRG1KP-201ENST00000623592 341 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 MIR4275-201ENST00000636486 87 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 AC138915.3-201ENST00000562908 1389 ntBASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PAAF1Q9BRP4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.84□□□□□ -1.8
PAAF1Q9BRP4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PAAF1Q9BRP4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PAAF1Q9BRP4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 RNA5SP50-201ENST00000363731 107 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 RNU6-169P-201ENST00000365336 107 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 Y_RNA.554-201ENST00000384672 102 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 BTF3P7-201ENST00000407097 488 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 TOMM22P1-201ENST00000418578 312 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 BX842559.1-201ENST00000419615 532 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 TIMM9P3-201ENST00000428659 274 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 FTH1P6-201ENST00000430768 320 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 ATP5HP2-201ENST00000433885 485 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC024082.2-201ENST00000434771 238 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC090774.1-201ENST00000435925 246 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AL662791.1-201ENST00000441992 928 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 U3.44-201ENST00000458938 192 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 snoU13.24-201ENST00000458998 104 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC008481.1-201ENST00000463278 396 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC139783.2-201ENST00000504847 1145 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC009646.1-201ENST00000510455 318 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 RNU6-718P-201ENST00000516166 105 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 RNU7-51P-201ENST00000516560 62 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 RNU6-1220P-201ENST00000517126 108 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC008489.1-201ENST00000524271 483 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC098848.2-201ENST00000588023 330 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC090517.2-201ENST00000614966 680 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AL359880.1-201ENST00000621879 266 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AL157700.1-201ENST00000561973 1432 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 ELF2P3-201ENST00000445099 1506 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AP001350.1-201ENST00000601906 1524 ntBASIC3.83□□□□□ -1.8
PAAF1Q9BRP4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms