Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC004486.1-201ENST00000546846 233 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 BNIP3P5-201ENST00000562290 498 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 MIR4999-201ENST00000585029 91 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 BBIP1P1-201ENST00000602999 279 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AP001330.4-201ENST00000604350 154 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC106791.2-201ENST00000604680 391 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 OR2AS2P-201ENST00000606902 342 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC004696.1-201ENST00000614345 607 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AL357080.1-201ENST00000617394 239 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.68□□□□□ -1.98
EBF4Q9BQW3 AC011477.1-204ENST00000623416 1325 ntBASIC2.68□□□□□ -1.98
EBF4Q9BQW3 DDX43P2-201ENST00000604753 1354 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AL391994.1-201ENST00000254724 282 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 SNORA48.5-201ENST00000391143 135 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AL590084.2-201ENST00000401481 382 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 MTCYBP34-201ENST00000439552 670 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AL591503.2-201ENST00000442314 1005 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 USP9YP10-201ENST00000454868 628 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 ANKRD26P4-201ENST00000455755 950 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC090525.1-201ENST00000479116 478 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC068587.1-201ENST00000483613 781 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC108043.1-201ENST00000512696 574 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC117532.1-201ENST00000514638 323 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 MTCO2P32-201ENST00000514865 403 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 SNORA74D-201ENST00000516404 141 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 FAM60BP-201ENST00000578364 658 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 MIR5004-201ENST00000579078 107 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 PIGPP4-201ENST00000584447 307 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 VN1R82P-201ENST00000601481 356 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 BDH2P1-201ENST00000602288 736 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC146944.4-201ENST00000602697 718 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 DUXAP11-201ENST00000603858 526 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AL022099.1-201ENST00000604551 712 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 MIR6798-201ENST00000612887 67 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AL355810.1-201ENST00000614629 552 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 MIR7975-201ENST00000619350 68 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 AC079228.1-201ENST00000624774 1049 ntBASIC2.67□□□□□ -1.98
EBF4Q9BQW3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.67□□□□□ -1.98
EBF4Q9BQW3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
EBF4Q9BQW3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
EBF4Q9BQW3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.66□□□□□ -1.98
EBF4Q9BQW3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.66□□□□□ -1.98
EBF4Q9BQW3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
EBF4Q9BQW3 AL021407.1-201ENST00000404531 386 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
EBF4Q9BQW3 RPL19P1-201ENST00000411635 428 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.66□□□□□ -1.98
EBF4Q9BQW3 AL589823.1-201ENST00000429577 183 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.66□□□□□ -1.98
EBF4Q9BQW3 MTND2P4-201ENST00000445034 1004 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 MTCYBP3-201ENST00000445588 1137 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 AL109741.2-201ENST00000455561 343 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 AP001025.2-201ENST00000490908 477 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.66□□□□□ -1.98
EBF4Q9BQW3 AC105313.1-201ENST00000509121 353 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 LTV1P1-201ENST00000510683 1237 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 MTCYBP43-201ENST00000513621 740 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 AC090136.1-201ENST00000520009 240 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 HMGB1P41-201ENST00000520234 440 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 PSMA2P1-201ENST00000526365 646 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
EBF4Q9BQW3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.66□□□□□ -1.98
EBF4Q9BQW3 MIR3670-2-201ENST00000582974 65 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 MIR3670-1-201ENST00000584160 65 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 MIR3670-3-201ENST00000584855 65 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 AC093227.2-201ENST00000589357 285 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.66□□□□□ -1.98
EBF4Q9BQW3 AL356575.1-201ENST00000603008 283 ntBASIC2.66□□□□□ -1.98
EBF4Q9BQW3 AL596327.1-201ENST00000603629 213 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms