Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.17□□□□□ -1.9
GFI1Q99684 HMGB3P15-201ENST00000507326 574 ntBASIC3.17□□□□□ -1.9
GFI1Q99684 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.17□□□□□ -1.9
GFI1Q99684 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.17□□□□□ -1.9
GFI1Q99684 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.17□□□□□ -1.9
GFI1Q99684 RNU6-720P-201ENST00000516363 108 ntBASIC3.17□□□□□ -1.9
GFI1Q99684 RNU6-410P-201ENST00000517006 107 ntBASIC3.17□□□□□ -1.9
GFI1Q99684 RNA5SP291-201ENST00000517222 105 ntBASIC3.17□□□□□ -1.9
GFI1Q99684 HIGD1AP5-201ENST00000529959 259 ntBASIC3.17□□□□□ -1.9
GFI1Q99684 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GFI1Q99684 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.17□□□□□ -1.9
GFI1Q99684 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.17□□□□□ -1.9
GFI1Q99684 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.17□□□□□ -1.9
GFI1Q99684 TGIF1P1-201ENST00000558095 802 ntBASIC3.17□□□□□ -1.9
GFI1Q99684 MIR4644-201ENST00000579929 84 ntBASIC3.17□□□□□ -1.9
GFI1Q99684 GLUD1P4-201ENST00000590914 418 ntBASIC3.17□□□□□ -1.9
GFI1Q99684 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.17□□□□□ -1.9
GFI1Q99684 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.17□□□□□ -1.9
GFI1Q99684 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.17□□□□□ -1.9
GFI1Q99684 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.17□□□□□ -1.9
GFI1Q99684 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
GFI1Q99684 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.17□□□□□ -1.9
GFI1Q99684 CUL1P1-201ENST00000509510 2425 ntBASIC3.17□□□□□ -1.9
GFI1Q99684 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
GFI1Q99684 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
GFI1Q99684 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.16□□□□□ -1.9
GFI1Q99684 AC068647.1-201ENST00000489539 2265 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GFI1Q99684 RNA5SP295-201ENST00000362655 121 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 RNU6-181P-201ENST00000363225 107 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 RNA5SP97-201ENST00000365006 84 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 RNU6-108P-201ENST00000365558 107 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.16□□□□□ -1.9
GFI1Q99684 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GFI1Q99684 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
GFI1Q99684 MIR558-201ENST00000384920 94 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 RNU6-1197P-201ENST00000391183 107 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AP000567.1-201ENST00000406413 156 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 U3.42-201ENST00000408746 214 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 RNU6-55P-201ENST00000411092 107 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 RNU6-954P-201ENST00000411355 107 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 BX842559.1-201ENST00000419615 532 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 HMGB1P27-201ENST00000431429 603 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 BX679664.1-201ENST00000434429 253 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 RPL36AP6-201ENST00000435770 321 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.16□□□□□ -1.9
GFI1Q99684 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.16□□□□□ -1.9
GFI1Q99684 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.16□□□□□ -1.9
GFI1Q99684 MTND1P1-201ENST00000445453 368 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 NUTF2P3-201ENST00000448540 384 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AL162151.2-201ENST00000448875 158 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AC132479.1-201ENST00000449160 144 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.16□□□□□ -1.9
GFI1Q99684 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.16□□□□□ -1.9
GFI1Q99684 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.16□□□□□ -1.9
GFI1Q99684 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.16□□□□□ -1.9
GFI1Q99684 RPL37P6-201ENST00000460682 294 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 RPS20P22-201ENST00000473700 357 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AC011825.1-201ENST00000484967 388 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AC007182.2-201ENST00000489251 402 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 CEACAMP10-202ENST00000495431 496 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 HMGB1P29-201ENST00000505659 499 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.16□□□□□ -1.9
GFI1Q99684 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.16□□□□□ -1.9
GFI1Q99684 RNU6-927P-201ENST00000516199 100 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 RNU6-1256P-201ENST00000516539 103 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 RNU6-445P-201ENST00000516949 107 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 HMGB1P41-201ENST00000520234 440 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.16□□□□□ -1.9
GFI1Q99684 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.16□□□□□ -1.9
GFI1Q99684 NCAPGP2-201ENST00000557911 754 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.16□□□□□ -1.9
GFI1Q99684 AC098848.2-201ENST00000588023 330 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AC093227.2-201ENST00000589357 285 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.16□□□□□ -1.9
GFI1Q99684 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.16□□□□□ -1.9
GFI1Q99684 AC008745.1-201ENST00000604064 271 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AL592436.1-201ENST00000605135 558 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.16□□□□□ -1.9
GFI1Q99684 AC022149.2-201ENST00000621061 203 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 AC007998.5-201ENST00000622938 237 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 LRRC77P-213ENST00000637727 880 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
GFI1Q99684 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
GFI1Q99684 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GFI1Q99684 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GFI1Q99684 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GFI1Q99684 AC066616.2-201ENST00000559334 1481 ntBASIC3.16□□□□□ -1.9
GFI1Q99684 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.15□□□□□ -1.9
GFI1Q99684 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.15□□□□□ -1.9
GFI1Q99684 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
GFI1Q99684 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
GFI1Q99684 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.15□□□□□ -1.91
GFI1Q99684 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
GFI1Q99684 SNORD6-201ENST00000365444 73 ntBASIC3.15□□□□□ -1.91
GFI1Q99684 RNU6-701P-201ENST00000384059 107 ntBASIC3.15□□□□□ -1.91
GFI1Q99684 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
GFI1Q99684 FAT1P1-201ENST00000406588 507 ntBASIC3.15□□□□□ -1.91
GFI1Q99684 RNU2-39P-201ENST00000410604 198 ntBASIC3.15□□□□□ -1.91
GFI1Q99684 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms