Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 Y_RNA.145-201ENST00000363527 102 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNA5SP48-201ENST00000363969 126 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNU6-82P-201ENST00000363970 107 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.489-201ENST00000384410 101 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNA5SP489-201ENST00000410986 109 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 CYCSP4-201ENST00000429682 331 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RPL17P35-201ENST00000432217 549 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AL159987.2-201ENST00000432754 307 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 NDUFB4P8-201ENST00000435351 367 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RPL21P71-201ENST00000465598 459 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RPL7P22-201ENST00000466005 733 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RN7SL441P-201ENST00000492388 296 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.655-201ENST00000515919 96 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.686-201ENST00000516548 134 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNU6-1183P-201ENST00000517054 60 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 PSMA2P1-201ENST00000526365 646 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC040926.1-201ENST00000530195 238 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 FKBP1BP1-201ENST00000553366 325 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 COX6CP3-201ENST00000580869 223 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AL355297.2-201ENST00000604792 129 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC108676.2-201ENST00000605225 163 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 Z99129.2-201ENST00000619967 314 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC009831.4-201ENST00000620744 325 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC008443.7-201ENST00000622195 246 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 MIR6500-201ENST00000622700 86 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 PISRT1-201ENST00000626175 531 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AL359195.2-201ENST00000623657 4412 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 DHX9P1-201ENST00000436565 3076 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 SNORD56.6-201ENST00000384569 71 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNA5SP36-201ENST00000410197 133 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RNF10P1-201ENST00000418589 369 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AL691482.1-201ENST00000453255 87 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 HSFY5P-201ENST00000453726 309 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RPS4XP10-201ENST00000465034 731 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC078857.1-201ENST00000469870 667 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC093663.2-201ENST00000484625 313 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 RN7SL271P-201ENST00000487601 295 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC006960.3-201ENST00000561845 705 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 MIR4672-201ENST00000583126 81 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AL133445.2-201ENST00000611191 527 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC243654.2-201ENST00000612843 443 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 AC106754.2-201ENST00000623006 233 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 ATE1-AS1-202ENST00000636460 506 ntBASIC1.4□□□□□ -2.19
HMCN1Q96RW7 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HMCN1Q96RW7 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC079780.1-201ENST00000428259 207 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 RABEPKP1-201ENST00000440529 1026 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 BTF3P5-201ENST00000457252 467 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC087884.1-201ENST00000469738 328 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC140059.1-201ENST00000489238 361 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 RPS17P5-201ENST00000498293 408 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 RPL37P25-201ENST00000507308 276 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC025946.2-201ENST00000603398 234 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AP002906.1-201ENST00000603405 233 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 APOOP1-201ENST00000604695 592 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 FAM27D1-201ENST00000612308 341 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 MIR6129-201ENST00000616087 109 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC1.39□□□□□ -2.19
HMCN1Q96RW7 AC083843.2-201ENST00000568248 6253 ntBASIC1.39□□□□□ -2.19
HMCN1Q96RW7 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms