Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CBWD4P-201ENST00000445695 655 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AC020550.1-201ENST00000447385 163 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AC006480.1-201ENST00000449887 378 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AL359385.1-201ENST00000456509 365 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.48□□□□□ -1.85
NR1H4Q96RI1 RN7SL432P-201ENST00000484057 298 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.48□□□□□ -1.85
NR1H4Q96RI1 SNORA64.4-201ENST00000516632 81 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AC104027.1-201ENST00000521887 300 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AP002963.1-201ENST00000530590 184 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AC053481.4-201ENST00000583164 216 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AL139286.2-201ENST00000606838 396 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AC100793.4-201ENST00000613683 429 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AC090132.2-201ENST00000615881 347 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 AC068831.7-201ENST00000616954 363 ntBASIC3.48□□□□□ -1.85
NR1H4Q96RI1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
NR1H4Q96RI1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.48□□□□□ -1.85
NR1H4Q96RI1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC007823.1-201ENST00000569932 1566 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 HSPE1P11-201ENST00000339579 310 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 SNORD56.2-201ENST00000363242 71 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 RNU6-511P-201ENST00000363496 107 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 Y_RNA.359-201ENST00000365498 102 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 Y_RNA.436-201ENST00000384097 102 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 U3.22-201ENST00000391120 215 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 RPS3AP36-201ENST00000398190 775 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 NDUFS5P1-201ENST00000405668 289 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 RNU4-25P-201ENST00000410569 230 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 MORF4L1P6-201ENST00000418771 268 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC007283.2-201ENST00000424739 197 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 HMGB1P27-201ENST00000431429 603 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC104850.1-201ENST00000435940 476 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 HMGN1P18-201ENST00000457642 277 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 RPL38P1-201ENST00000460914 211 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC091179.1-201ENST00000461606 579 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC011276.1-201ENST00000469688 323 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 RPS20P22-201ENST00000473700 357 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 RPL30P14-201ENST00000482744 348 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC093840.1-201ENST00000511599 336 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 RNA5SP208-201ENST00000516156 78 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 RN7SKP258-201ENST00000517151 304 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 OR5G4P-201ENST00000525251 760 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC091516.1-201ENST00000549191 703 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 RPL21P12-201ENST00000559810 515 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 MIR4528-201ENST00000577763 90 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC068790.2-201ENST00000602601 557 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC073648.5-201ENST00000603502 305 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC013553.2-201ENST00000604244 589 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC103710.2-201ENST00000609912 942 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC019193.2-201ENST00000610012 634 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC009509.4-201ENST00000619202 509 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC022149.2-201ENST00000621061 203 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AL732618.1-201ENST00000623251 301 ntBASIC3.47□□□□□ -1.85
NR1H4Q96RI1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.47□□□□□ -1.85
NR1H4Q96RI1 AC068647.1-201ENST00000489539 2265 ntBASIC3.46□□□□□ -1.85
NR1H4Q96RI1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
NR1H4Q96RI1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NR1H4Q96RI1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
NR1H4Q96RI1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NR1H4Q96RI1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
NR1H4Q96RI1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NR1H4Q96RI1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NR1H4Q96RI1 RNU6-623P-201ENST00000363143 105 ntBASIC3.46□□□□□ -1.86
NR1H4Q96RI1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.46□□□□□ -1.86
NR1H4Q96RI1 RNU6-1119P-201ENST00000384349 108 ntBASIC3.46□□□□□ -1.86
NR1H4Q96RI1 RNU6-348P-201ENST00000384386 107 ntBASIC3.46□□□□□ -1.86
NR1H4Q96RI1 Y_RNA.559-201ENST00000384686 107 ntBASIC3.46□□□□□ -1.86
NR1H4Q96RI1 RNU6-195P-201ENST00000411352 109 ntBASIC3.46□□□□□ -1.86
NR1H4Q96RI1 NDUFB4P5-201ENST00000415445 361 ntBASIC3.46□□□□□ -1.86
NR1H4Q96RI1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.46□□□□□ -1.86
NR1H4Q96RI1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.46□□□□□ -1.86
NR1H4Q96RI1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.46□□□□□ -1.86
NR1H4Q96RI1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.46□□□□□ -1.86
NR1H4Q96RI1 DPPA2P1-201ENST00000428060 556 ntBASIC3.46□□□□□ -1.86
NR1H4Q96RI1 AC007919.1-201ENST00000429380 217 ntBASIC3.46□□□□□ -1.86
NR1H4Q96RI1 FCF1P1-201ENST00000432690 571 ntBASIC3.46□□□□□ -1.86
NR1H4Q96RI1 AL353705.1-201ENST00000433468 480 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms