Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
COL21A1Q96P44 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
COL21A1Q96P44 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.46□□□□□ -2.02
COL21A1Q96P44 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL21A1Q96P44 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.46□□□□□ -2.02
COL21A1Q96P44 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
COL21A1Q96P44 RNU6-859P-201ENST00000362728 107 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
COL21A1Q96P44 RNA5SP252-201ENST00000391131 119 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 RNU2-42P-201ENST00000410697 113 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 AC063976.3-201ENST00000426849 329 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 AC129850.1-201ENST00000436203 508 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 AP000949.1-201ENST00000438328 629 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 RPL23AP58-201ENST00000440453 469 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 MTCO2P25-201ENST00000447065 681 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 HMGN1P5-201ENST00000448591 263 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
COL21A1Q96P44 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 AL031183.1-201ENST00000457667 207 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 AL049829.1-201ENST00000465411 156 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 RPS27P27-201ENST00000498779 255 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 TMEM251P1-201ENST00000503717 318 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 RNA5SP356-201ENST00000515972 94 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 AC104763.2-201ENST00000604179 382 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 AC011451.2-201ENST00000604303 598 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 AL035413.2-201ENST00000604801 525 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 AC084824.4-201ENST00000620106 731 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL21A1Q96P44 ZNF519P1-201ENST00000449011 1626 ntBASIC2.45□□□□□ -2.02
COL21A1Q96P44 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
COL21A1Q96P44 MTCO1P9-201ENST00000505577 1534 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 RNU6-28P-201ENST00000362378 107 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 snoZ40.1-201ENST00000364540 72 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 RNU1-100P-201ENST00000365255 165 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.44□□□□□ -2.02
COL21A1Q96P44 NDUFB4P7-201ENST00000423198 363 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.44□□□□□ -2.02
COL21A1Q96P44 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.44□□□□□ -2.02
COL21A1Q96P44 AC019097.1-201ENST00000424783 735 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.44□□□□□ -2.02
COL21A1Q96P44 AC005297.2-201ENST00000450430 606 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 TRGVB-201ENST00000453257 471 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 MTND1P9-201ENST00000453775 944 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 RPS29P12-201ENST00000460178 152 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 AC126182.1-201ENST00000478134 357 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 AC004924.1-201ENST00000480160 781 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
COL21A1Q96P44 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.44□□□□□ -2.02
COL21A1Q96P44 HMGB1P28-201ENST00000507778 552 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.44□□□□□ -2.02
COL21A1Q96P44 AC096725.1-201ENST00000514266 313 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 RNU6-583P-201ENST00000516012 92 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 RN7SKP31-201ENST00000516354 278 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 MTND1P36-201ENST00000522384 936 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 AC087276.1-201ENST00000529659 480 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 AP000867.2-201ENST00000532468 320 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 AC123904.3-201ENST00000547218 814 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.44□□□□□ -2.02
COL21A1Q96P44 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.44□□□□□ -2.02
COL21A1Q96P44 ACTR3BP3-201ENST00000565577 979 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 HMGB1P6-201ENST00000569046 646 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 MIR4446-201ENST00000578505 67 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
COL21A1Q96P44 AL159972.1-201ENST00000625150 448 ntBASIC2.44□□□□□ -2.02
COL21A1Q96P44 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL21A1Q96P44 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.43□□□□□ -2.02
COL21A1Q96P44 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
COL21A1Q96P44 SNORD56.5-201ENST00000364281 72 ntBASIC2.43□□□□□ -2.02
COL21A1Q96P44 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
COL21A1Q96P44 RNU6-76P-201ENST00000384060 104 ntBASIC2.43□□□□□ -2.02
COL21A1Q96P44 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
COL21A1Q96P44 AL356057.3-201ENST00000402607 340 ntBASIC2.43□□□□□ -2.02
COL21A1Q96P44 MIR1261-201ENST00000408659 82 ntBASIC2.43□□□□□ -2.02
COL21A1Q96P44 RNA5SP184-201ENST00000411071 108 ntBASIC2.43□□□□□ -2.02
COL21A1Q96P44 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.43□□□□□ -2.02
COL21A1Q96P44 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.43□□□□□ -2.02
COL21A1Q96P44 ARL5AP4-201ENST00000430731 512 ntBASIC2.43□□□□□ -2.02
COL21A1Q96P44 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.43□□□□□ -2.02
COL21A1Q96P44 THAP5P1-201ENST00000439089 262 ntBASIC2.43□□□□□ -2.02
COL21A1Q96P44 RPL26P6-201ENST00000440913 438 ntBASIC2.43□□□□□ -2.02
COL21A1Q96P44 AC011816.1-201ENST00000441346 546 ntBASIC2.43□□□□□ -2.02
COL21A1Q96P44 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.43□□□□□ -2.02
COL21A1Q96P44 AC009237.8-201ENST00000445492 379 ntBASIC2.43□□□□□ -2.02
COL21A1Q96P44 AP000936.2-201ENST00000447151 681 ntBASIC2.43□□□□□ -2.02
COL21A1Q96P44 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms