Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 HMGB1P15-201ENST00000453854 435 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 HMGB1P21-201ENST00000502313 581 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 TXNP6-201ENST00000510190 310 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AC026333.2-201ENST00000542164 106 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 CBX3P5-201ENST00000552017 521 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 MIR3167-201ENST00000579623 85 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 UBE2L4-201ENST00000587688 464 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AC011451.2-201ENST00000604303 598 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 LARP7P1-201ENST00000605576 316 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AL161734.1-201ENST00000609720 557 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AC017083.3-201ENST00000609955 700 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 BX664608.1-201ENST00000610519 487 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AL133173.2-201ENST00000614270 90 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 uc_338.32-201ENST00000615087 172 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 DUXAP9-208ENST00000622815 614 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AL158801.5-201ENST00000623123 465 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AC079597.1-201ENST00000624306 508 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AC019226.1-201ENST00000625666 515 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AC011978.2-201ENST00000569835 2054 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 AC068647.1-201ENST00000489539 2265 ntBASIC4.05□□□□□ -1.76
CCDC17Q96LX7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC17Q96LX7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 Y_RNA.234-201ENST00000364409 97 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 RNU6-483P-201ENST00000384088 108 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 RNU6-878P-201ENST00000384578 110 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 RNU1-89P-201ENST00000384592 164 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 RPL23AP32-201ENST00000395315 459 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AL353193.1-201ENST00000421444 268 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC092832.1-201ENST00000422934 400 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 RPL30P3-201ENST00000424262 333 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC019097.1-201ENST00000424783 735 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC005300.1-201ENST00000428401 373 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AL049734.2-201ENST00000441066 616 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 RPS29P31-201ENST00000446147 164 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC007182.2-201ENST00000489251 402 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC105914.1-201ENST00000511798 226 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 SNORA70.24-201ENST00000517233 118 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AL845331.3-202ENST00000562856 261 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 MIR98-201ENST00000606724 119 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC069234.5-201ENST00000611056 416 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 MIR8058-201ENST00000615737 89 ntBASIC4.04□□□□□ -1.76
CCDC17Q96LX7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CCDC17Q96LX7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC17Q96LX7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCDC17Q96LX7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC17Q96LX7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC17Q96LX7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC17Q96LX7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC17Q96LX7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC17Q96LX7 FRG1BP-201ENST00000278882 761 ntBASIC4.03□□□□□ -1.76
CCDC17Q96LX7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC17Q96LX7 Y_RNA.159-201ENST00000363674 87 ntBASIC4.03□□□□□ -1.76
CCDC17Q96LX7 MIR491-201ENST00000384877 84 ntBASIC4.03□□□□□ -1.76
CCDC17Q96LX7 MTND4LP20-201ENST00000402379 270 ntBASIC4.03□□□□□ -1.76
CCDC17Q96LX7 FGF7P8-201ENST00000402994 292 ntBASIC4.03□□□□□ -1.76
CCDC17Q96LX7 AL391417.1-201ENST00000404100 426 ntBASIC4.03□□□□□ -1.76
CCDC17Q96LX7 AMD1P2-201ENST00000412936 992 ntBASIC4.03□□□□□ -1.76
CCDC17Q96LX7 AC004987.3-201ENST00000413879 771 ntBASIC4.03□□□□□ -1.76
CCDC17Q96LX7 AC138393.2-201ENST00000414742 246 ntBASIC4.03□□□□□ -1.76
CCDC17Q96LX7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CCDC17Q96LX7 MTCO1P20-201ENST00000425366 358 ntBASIC4.03□□□□□ -1.76
CCDC17Q96LX7 AC133104.1-201ENST00000429100 218 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms