Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.34□□□□□ -1.56
IFT43Q96FT9 AC023421.1-201ENST00000590535 1785 ntBASIC5.34□□□□□ -1.56
IFT43Q96FT9 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
IFT43Q96FT9 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
IFT43Q96FT9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
IFT43Q96FT9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 RPL23P2-201ENST00000320371 421 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 SNORA17.1-201ENST00000362945 126 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 RNU6-1249P-201ENST00000363237 111 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 Y_RNA.126-201ENST00000363382 111 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 RNU6-596P-201ENST00000365395 98 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 SNORA70E-201ENST00000384492 135 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 Y_RNA.577-201ENST00000384794 101 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 U3.36-201ENST00000408418 213 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 RNU6-712P-201ENST00000410558 100 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 EI24P4-201ENST00000423683 1078 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 HMGB1P27-201ENST00000431429 603 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 PRDX3P3-201ENST00000447765 522 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 FTH1P2-201ENST00000466086 412 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 AC022447.4-201ENST00000504053 364 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 MRPS33P2-201ENST00000507850 322 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 RNU6-840P-201ENST00000517275 65 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 AC040926.1-201ENST00000530195 238 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 RN7SL652P-201ENST00000577769 300 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 MIR4646-201ENST00000580775 63 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 AL162431.4-201ENST00000604674 411 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 AL161616.1-201ENST00000611867 286 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
IFT43Q96FT9 AL031601.2-202ENST00000622650 282 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 AP002799.1-201ENST00000623552 423 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
IFT43Q96FT9 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.33□□□□□ -1.56
IFT43Q96FT9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
IFT43Q96FT9 EOGT-210ENST00000615922 1931 ntBASIC5.33□□□□□ -1.56
IFT43Q96FT9 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
IFT43Q96FT9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.32□□□□□ -1.56
IFT43Q96FT9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
IFT43Q96FT9 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
IFT43Q96FT9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
IFT43Q96FT9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
IFT43Q96FT9 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
IFT43Q96FT9 Y_RNA.14-201ENST00000362415 103 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 Y_RNA.222-201ENST00000364264 102 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 RNA5SP223-201ENST00000365174 120 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
IFT43Q96FT9 MIR589-201ENST00000385238 99 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 MT-TW-201ENST00000387382 68 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 DUTP5-201ENST00000406790 469 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 RPL7AP73-201ENST00000413490 353 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 BX276092.3-201ENST00000424182 230 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 AL133396.1-201ENST00000432048 687 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.32□□□□□ -1.56
IFT43Q96FT9 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.32□□□□□ -1.56
IFT43Q96FT9 AL031274.1-201ENST00000450334 232 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 RPL23AP31-201ENST00000456160 467 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 snoU13.3-201ENST00000459441 104 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 RNU6-914P-201ENST00000516749 109 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.32□□□□□ -1.56
IFT43Q96FT9 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.32□□□□□ -1.56
IFT43Q96FT9 AC126177.3-201ENST00000551839 688 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 RPL23AP87-202ENST00000573039 466 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 MIR5188-201ENST00000583467 113 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 RN7SL435P-201ENST00000584418 282 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 AC011447.4-201ENST00000587562 111 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 AC006116.3-201ENST00000592968 361 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.32□□□□□ -1.56
IFT43Q96FT9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
IFT43Q96FT9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
IFT43Q96FT9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
IFT43Q96FT9 AC008669.1-201ENST00000565823 2178 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
IFT43Q96FT9 AC104623.2-202ENST00000623477 4002 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.32□□□□□ -1.56
IFT43Q96FT9 PRO1804-201ENST00000623780 2050 ntBASIC5.32□□□□□ -1.56
IFT43Q96FT9 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
IFT43Q96FT9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
IFT43Q96FT9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
IFT43Q96FT9 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
IFT43Q96FT9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
IFT43Q96FT9 Y_RNA.60-201ENST00000362831 98 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 RNU1-43P-201ENST00000365052 165 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 Y_RNA.551-201ENST00000384661 102 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 GLULP6-201ENST00000399502 913 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 AL645733.1-201ENST00000402250 217 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 MIR548M-201ENST00000408260 86 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 RNU6-1156P-201ENST00000410365 100 ntBASIC5.31□□□□□ -1.56
IFT43Q96FT9 RNU6-174P-201ENST00000410406 106 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms