Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 AC007823.1-201ENST00000569932 1566 ntBASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
TRIM43Q96BQ3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AL079305.1-201ENST00000623159 3008 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AC007685.1-201ENST00000329806 452 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 RNU4-12P-201ENST00000365233 139 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 RNU6-169P-201ENST00000365336 107 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 RNU6-629P-201ENST00000384061 103 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 RNU6-1181P-201ENST00000384191 106 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 Y_RNA.500-201ENST00000384466 111 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 Y_RNA.554-201ENST00000384672 102 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 MIR195-201ENST00000385194 87 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 BTF3P7-201ENST00000407097 488 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 RPS3AP24-201ENST00000407896 734 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 RNA5SP107-201ENST00000411358 122 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 USP9YP18-201ENST00000425912 695 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 GPR143P-201ENST00000434155 205 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 HMGB1P37-201ENST00000439613 609 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 MTATP6P30-201ENST00000443540 664 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 Z99127.3-201ENST00000448158 395 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 RNU6-718P-201ENST00000516166 105 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 RNU6-64P-201ENST00000517119 105 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 MTCYBP41-201ENST00000528913 1123 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AC125611.2-201ENST00000551907 647 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AL022099.1-201ENST00000604551 712 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AL137849.1-201ENST00000604767 169 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AL136363.1-201ENST00000605349 337 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AL450472.3-201ENST00000615578 367 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 MIR4275-201ENST00000636486 87 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 AC138915.3-201ENST00000562908 1389 ntBASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
TRIM43Q96BQ3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 Y_RNA.9-201ENST00000362354 101 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 SNORD56.2-201ENST00000363242 71 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 RNU5E-8P-201ENST00000363502 116 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 Y_RNA.372-201ENST00000365599 102 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 BX842559.1-201ENST00000419615 532 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC005094.1-201ENST00000440420 368 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC079781.2-201ENST00000446424 169 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 HMGN2P21-201ENST00000447764 270 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AL162389.1-201ENST00000449233 177 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC013267.1-201ENST00000458227 267 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC010285.1-201ENST00000470580 392 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC010342.1-201ENST00000514047 877 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 RNU2-10P-201ENST00000516375 211 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 RNU6-410P-201ENST00000517006 107 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC103843.2-201ENST00000530523 682 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC104662.1-201ENST00000604448 511 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC092954.2-201ENST00000609103 430 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 TUG1_2.1-201ENST00000614234 87 ntBASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRIM43Q96BQ3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms