Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SNORA31.24-201ENST00000517232 57 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AL078605.1-201ENST00000603529 500 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC002076.2-201ENST00000617362 122 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 RNY4P27-201ENST00000363341 96 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 RNA5SP489-201ENST00000410986 109 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC021146.7-201ENST00000509604 775 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 SNORA14.1-201ENST00000516113 141 ntBASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC0.69□□□□□ -2.3
SYNE2Q8WXH0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 DEFB108F-201ENST00000344638 222 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC068305.1-201ENST00000497406 726 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 MTATP6P3-201ENST00000581686 676 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 MTND5P10-201ENST00000603719 1809 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 RNU6-418P-201ENST00000384035 107 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 WARS2P1-201ENST00000429678 537 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AL445687.1-201ENST00000439946 251 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AL590664.1-201ENST00000448065 339 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC068276.1-201ENST00000605793 379 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC092447.10-201ENST00000620607 1652 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.630-201ENST00000411370 108 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 RN7SKP101-201ENST00000411376 320 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AL513175.2-201ENST00000422071 443 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 RAC1P8-201ENST00000427086 527 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AP005639.2-201ENST00000527592 928 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC078918.1-201ENST00000498515 228 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 RNU6-782P-201ENST00000516852 104 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 MKKS-204ENST00000639674 192 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 OR5H6-203ENST00000642105 978 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 U3.23-201ENST00000391132 200 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC020661.2-201ENST00000560114 134 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 SNORA51.2-201ENST00000364595 132 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 MIR142-201ENST00000384835 87 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC034236.3-201ENST00000605999 461 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 AC004492.1-201ENST00000607036 742 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 CYP3A51P-201ENST00000633513 256 ntBASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
SYNE2Q8WXH0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AL021368.2-201ENST00000606125 5352 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 MIR21-201ENST00000362134 72 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 SNORD114-23-201ENST00000363536 72 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 CBX3P6-201ENST00000430257 527 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 HMGB1P41-201ENST00000520234 440 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 RNU6-60P-201ENST00000364792 103 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 MIR1912-201ENST00000410389 80 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 MTCO3P30-201ENST00000426425 670 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AC006270.3-201ENST00000605967 1036 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AC079298.2-201ENST00000623885 459 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 SNORA18.2-201ENST00000383865 132 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.582-201ENST00000391023 95 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AL022718.1-201ENST00000412004 84 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 USP9YP15-201ENST00000442391 422 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AL121877.1-201ENST00000453704 622 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.812-201ENST00000610788 101 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.784-201ENST00000613803 101 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.787-201ENST00000616522 101 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.780-201ENST00000617336 101 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.801-201ENST00000619005 101 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 RNA5SP383-201ENST00000362934 120 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms