Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL136520.1-201ENST00000600311 1322 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC009902.3-201ENST00000606235 2172 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 CENPCP1-201ENST00000533085 2578 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 RNA5SP338-201ENST00000410495 85 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC007115.1-201ENST00000546853 234 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC106791.2-201ENST00000604680 391 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AP003122.6-201ENST00000623831 495 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 CCT4P2-201ENST00000233836 1548 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 MTCO1P6-201ENST00000481192 1384 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 FO393413.1-201ENST00000402892 195 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 EIF1AXP1-201ENST00000419267 435 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 RPS24P6-201ENST00000452670 400 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 MIR548Y-201ENST00000582739 110 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC117490.2-201ENST00000610042 594 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC243773.3-201ENST00000613270 256 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 HDX-206ENST00000506585 6158 ntTSL 2 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 HMGB3P31-201ENST00000413333 595 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC073310.1-201ENST00000423226 1033 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AP004371.1-201ENST00000525240 214 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC098848.2-201ENST00000588023 330 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 HMGB1P11-201ENST00000413899 637 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 NDUFB4P6-201ENST00000436819 366 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 RPL31P41-201ENST00000477967 372 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 RNU6-56P-201ENST00000516986 93 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 MIR4452-201ENST00000583004 71 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC009314.1-201ENST00000603871 304 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 HSPE1P14-201ENST00000605812 302 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 U6.48-201ENST00000618523 106 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AP000553.5-201ENST00000641933 54 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 RNU6-730P-201ENST00000383954 104 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 FTH1P12-201ENST00000432137 551 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 OR6C72P-201ENST00000451403 892 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC087373.1-201ENST00000524920 491 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 NBEAP1-201ENST00000554452 979 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC069304.3-201ENST00000603938 1084 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC242628.1-201ENST00000606810 391 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 OR10AB1P-201ENST00000609613 938 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 MTND4P11-201ENST00000417020 1058 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 SSXP9-201ENST00000417503 292 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 MTCO3P30-201ENST00000426425 670 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC079776.3-201ENST00000450665 370 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC008427.1-201ENST00000503102 655 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 SEM1P1-201ENST00000506694 209 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 FABP5P6-201ENST00000510588 409 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 HMGB1P1-201ENST00000522557 636 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 ACTR3BP3-201ENST00000565577 979 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 PCNAP1-202ENST00000595299 752 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 Y_RNA.68-201ENST00000362881 102 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 SSXP10-201ENST00000402595 565 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AL021407.1-201ENST00000404531 386 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AL355497.1-201ENST00000406262 551 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 KLRA1P-201ENST00000503499 986 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC117532.1-201ENST00000514638 323 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 RNU1-61P-201ENST00000516107 151 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 SNORA67.1-201ENST00000364749 141 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 PGBD4P3-201ENST00000440731 581 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 ZNF92P3-201ENST00000596594 954 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AL645939.4-201ENST00000604495 135 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 AC091932.3-201ENST00000624223 323 ntBASIC0.56□□□□□ -2.32
SYNE1Q8NF91 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.56□□□□□ -2.32
SYNE1Q8NF91 SGO1P2-201ENST00000429458 1589 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms