Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC139713.2-214ENST00000642059 1811 ntBASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SIMC1Q8NDZ2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 RIOK3P1-201ENST00000418778 1528 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 NACAP2-201ENST00000318548 624 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 RNU6-600P-201ENST00000362524 99 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 Y_RNA.474-201ENST00000384341 102 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 RNU6-738P-201ENST00000384531 106 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 MIR606-201ENST00000384851 96 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 RNU6-510P-201ENST00000391239 108 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AC097374.1-203ENST00000400783 485 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AL591416.1-201ENST00000404015 867 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 RNU4-25P-201ENST00000410569 230 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 RN7SKP140-201ENST00000411196 284 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 MTND3P8-201ENST00000412909 339 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 ATP5JP1-201ENST00000431631 322 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 RPL23AP30-201ENST00000432419 501 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 IFNA20P-201ENST00000436840 528 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AL162591.2-201ENST00000449634 317 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 CACYBPP2-201ENST00000453625 678 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 Y_RNA.632-201ENST00000459189 102 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AC233702.1-201ENST00000482905 502 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 HMGB1P22-201ENST00000505315 124 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AC026402.1-201ENST00000513642 170 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 BTF3P12-201ENST00000519620 469 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 HMGN1P28-201ENST00000521340 364 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AP000827.1-201ENST00000527814 258 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AC087241.2-201ENST00000535801 324 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AL360157.1-201ENST00000565962 87 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 KC877982.1-201ENST00000602313 470 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AL354950.2-201ENST00000617939 290 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AL360181.4-201ENST00000621752 134 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AC034229.5-201ENST00000624258 185 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 MIR4275-201ENST00000636486 87 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 MTND5P42-201ENST00000637720 498 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 MTND4P27-201ENST00000450813 1354 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 MTND4P35-201ENST00000604257 1375 ntBASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SIMC1Q8NDZ2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 MIR331-201ENST00000362302 94 ntBASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 RNU6-1097P-201ENST00000363586 107 ntBASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 Y_RNA.184-201ENST00000363884 108 ntBASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 RNA5SP22-201ENST00000365393 109 ntBASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 RNU1-64P-201ENST00000365443 163 ntBASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 SNORA75.4-201ENST00000391278 119 ntBASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 AL136116.1-201ENST00000403591 381 ntBASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 SRIP2-201ENST00000428470 166 ntBASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 VDAC1P3-201ENST00000434069 851 ntBASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 GPR143P-201ENST00000434155 205 ntBASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 AC119618.1-201ENST00000434191 222 ntBASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.11□□□□□ -1.75
SIMC1Q8NDZ2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms