Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AC027514.1-201ENST00000588561 1603 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 RNU5E-1-201ENST00000362477 120 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 SNORD46.1-201ENST00000364139 104 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 DEFB109C-201ENST00000382575 264 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 DEFB109B-201ENST00000382656 264 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 Y_RNA.516-201ENST00000384541 124 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 RNU2-43P-201ENST00000410306 190 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AC127391.1-201ENST00000411737 98 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 RPS15AP12-201ENST00000419498 388 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 PIGFP2-201ENST00000421400 651 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AC079780.1-201ENST00000428259 207 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 OR2B8P-201ENST00000432841 938 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AC104850.1-201ENST00000435940 476 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 DNAJC19P4-201ENST00000440115 345 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 USP9YP15-201ENST00000442391 422 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 MTND1P1-201ENST00000445453 368 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 PRDX3P3-201ENST00000447765 522 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 MTCO2P29-201ENST00000465212 189 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 RBM43P1-201ENST00000476891 1081 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 RPL9P33-201ENST00000484311 566 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 RPS3AP50-201ENST00000487064 803 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 Vault.3-201ENST00000516676 95 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 RNA5SP468-201ENST00000516782 93 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AC103843.2-201ENST00000530523 682 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 SYF2P1-201ENST00000550658 413 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AL133153.1-201ENST00000557756 303 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AL161734.1-201ENST00000609720 557 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AC245517.5-201ENST00000611529 162 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AL133173.2-201ENST00000614270 90 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AC136475.10-201ENST00000620253 385 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AL353748.2-201ENST00000622148 471 ntBASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SCN4BQ8IWT1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 MIR208A-201ENST00000362287 71 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 Y_RNA.6-201ENST00000362350 114 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 RNA5SP50-201ENST00000363731 107 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 RN7SKP226-201ENST00000364912 300 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 Y_RNA.296-201ENST00000364930 108 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 RNU6-278P-201ENST00000390945 109 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 RNU6-754P-201ENST00000391166 107 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 RNA5SP44-201ENST00000410446 133 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 RNU4-65P-201ENST00000410473 140 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 RNU2-62P-201ENST00000410868 191 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 SSXP9-201ENST00000417503 292 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 CYCSP4-201ENST00000429682 331 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 RPL31P35-201ENST00000431058 377 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC093156.1-201ENST00000440382 670 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AL136380.1-201ENST00000447970 162 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 MTCO3P20-201ENST00000454926 688 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AL359385.1-201ENST00000456509 365 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC025518.1-201ENST00000479856 347 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC135721.1-201ENST00000497954 479 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC114967.1-201ENST00000504890 259 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC022483.1-201ENST00000514020 567 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 DEFB108A-201ENST00000530110 222 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 SNRPGP16-201ENST00000533275 226 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC016957.1-201ENST00000534895 309 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 FAM60BP-201ENST00000578364 658 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 SRGNP1-201ENST00000603392 451 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AP001330.4-201ENST00000604350 154 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AL022154.1-201ENST00000604698 785 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC073534.2-201ENST00000620377 381 ntBASIC3.77□□□□□ -1.81
SCN4BQ8IWT1 AC068880.5-201ENST00000624331 290 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms