Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC121333.1-201ENST00000567488 2709 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VRK3Q8IV63 RNU1-108P-201ENST00000362556 161 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 RNU5E-8P-201ENST00000363502 116 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 RNY3P13-201ENST00000365542 102 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 RNU6-1013P-201ENST00000384180 107 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 MIR568-201ENST00000385036 95 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 SNORD37.1-201ENST00000390968 65 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 RNU2-29P-201ENST00000410423 189 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 RN7SKP158-201ENST00000410453 326 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC113618.1-201ENST00000416747 285 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 ARL5AP1-201ENST00000418991 388 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 MED13P1-201ENST00000428342 171 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 RPL23AP46-201ENST00000438548 490 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC006011.1-201ENST00000442758 349 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 RPL21P89-201ENST00000444021 467 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC104308.1-201ENST00000454621 333 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 RPS23P7-201ENST00000466210 444 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AL135752.1-201ENST00000479477 471 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC021382.1-201ENST00000483523 359 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 CEACAMP10-202ENST00000495431 496 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 FTH1P21-201ENST00000512179 511 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC104057.1-201ENST00000515547 497 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 RN7SKP122-201ENST00000515923 296 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 RNU6-794P-201ENST00000517261 64 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 OR5B10P-201ENST00000532869 642 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC090615.1-201ENST00000577519 154 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC060771.1-201ENST00000582031 164 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AP000654.2-201ENST00000605633 586 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC245517.5-201ENST00000611529 162 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AP001486.3-201ENST00000615334 372 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 MIR7151-201ENST00000617477 60 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 AC091925.1-201ENST00000623204 462 ntBASIC4.06□□□□□ -1.76
VRK3Q8IV63 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VRK3Q8IV63 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VRK3Q8IV63 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
VRK3Q8IV63 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VRK3Q8IV63 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VRK3Q8IV63 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VRK3Q8IV63 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VRK3Q8IV63 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VRK3Q8IV63 Y_RNA.112-201ENST00000363250 102 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 RNU6-1309P-201ENST00000363305 108 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 RNU5A-8P-201ENST00000364102 114 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 U3.11-201ENST00000364476 212 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 RNU4-66P-201ENST00000365199 138 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 SNORA62-201ENST00000365493 153 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 Y_RNA.401-201ENST00000383965 117 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 COX6CP15-201ENST00000426313 211 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 snoU13.8-201ENST00000458890 104 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 RNU7-182P-201ENST00000459009 62 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 AL136126.1-201ENST00000473603 402 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 AC087879.1-201ENST00000474343 374 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 AC093303.1-201ENST00000514549 295 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 SNORA31.9-201ENST00000516429 84 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 snoU109.6-201ENST00000516831 118 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 MRPL49P2-201ENST00000521066 465 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 IFITM8P-201ENST00000522529 394 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 OR4P1P-201ENST00000530808 1136 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 AP000857.1-201ENST00000532151 543 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 AC025884.1-201ENST00000556034 378 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 AL590392.1-201ENST00000604960 446 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 CTHRC1P1-201ENST00000605383 469 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 AC023813.4-201ENST00000607580 580 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 MIR6716-201ENST00000613413 80 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 MIR6810-201ENST00000622701 70 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms