Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC000403.1-201ENST00000613696 3585 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 OR1S2-201ENST00000302592 978 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 Y_RNA.608-201ENST00000410647 95 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AL359704.1-201ENST00000411586 781 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 MTND1P34-201ENST00000438556 671 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 LARP1BP2-201ENST00000486594 519 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 NDUFB4P2-201ENST00000509515 391 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 CDC42P4-201ENST00000510507 563 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 RN7SKP298-201ENST00000515950 94 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AC103783.1-201ENST00000520506 373 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 NDUFB9P3-201ENST00000521269 501 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AC091805.2-201ENST00000603848 235 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AL136363.2-201ENST00000604173 851 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 Z99129.1-201ENST00000612510 255 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AC104010.1-201ENST00000616889 150 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AC026585.1-201ENST00000619582 524 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 USP8P1-201ENST00000494673 3183 ntBASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
KRT28Q7Z3Y7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AC027287.1-201ENST00000553115 1453 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 NCAPGP1-201ENST00000505112 1814 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 RNU6-348P-201ENST00000384386 107 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 RNU6-192P-201ENST00000391253 100 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 FCF1P10-201ENST00000407590 479 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AL031779.1-201ENST00000415663 330 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 MTCO1P21-201ENST00000416634 589 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AL139413.1-201ENST00000421309 217 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 EZH2P1-201ENST00000431167 291 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 UBE2V1P13-201ENST00000436983 439 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 RPL32P28-201ENST00000443577 397 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AL353691.1-201ENST00000451332 387 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AP1S2P1-201ENST00000457344 379 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 RPS4XP2-201ENST00000458402 793 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 RPL23AP67-201ENST00000465341 474 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 TMEM248P1-201ENST00000510579 951 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 RN7SKP132-201ENST00000516001 208 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 RNU6-1003P-201ENST00000517099 105 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 CBX3P5-201ENST00000552017 521 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AC007424.1-203ENST00000554613 687 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AC245505.1-201ENST00000556398 224 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 MIR4528-201ENST00000577763 90 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 BNIP3P10-201ENST00000605360 577 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AC007390.2-201ENST00000606229 3803 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 OR10AB1P-201ENST00000609613 938 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AC131902.3-201ENST00000611767 581 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AC005332.10-201ENST00000612725 619 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 uc_338.32-201ENST00000615087 172 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AL590099.1-201ENST00000615276 138 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 AC018755.4-201ENST00000619715 454 ntBASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRT28Q7Z3Y7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 RN7SKP44-201ENST00000363602 316 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 RPS20P2-201ENST00000402520 389 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 HMGB3P23-201ENST00000414981 585 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AL135938.1-201ENST00000443141 297 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms