Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC008638.3-201ENST00000603341 463 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC007998.5-201ENST00000622938 237 ntBASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RUFY4Q6ZNE9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
RUFY4Q6ZNE9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RUFY4Q6ZNE9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
RUFY4Q6ZNE9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RUFY4Q6ZNE9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.96□□□□□ -1.61
RUFY4Q6ZNE9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
RUFY4Q6ZNE9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 RN7SKP224-201ENST00000364140 325 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 RNU1-64P-201ENST00000365443 163 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 SNORA48.7-201ENST00000391302 135 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 AL583835.1-201ENST00000399570 407 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 RNU6-712P-201ENST00000410558 100 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 RPL7P10-201ENST00000417407 739 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 RPL21P112-201ENST00000434403 463 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 DHFRP3-201ENST00000455595 559 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 RPL21P8-201ENST00000465083 535 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 AC108022.1-201ENST00000493466 478 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 TRAV8-5-201ENST00000537369 341 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 AC015912.2-201ENST00000571053 181 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 AF038458.1-201ENST00000588406 262 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 AC093227.2-201ENST00000589357 285 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 LLPHP1-201ENST00000603571 367 ntBASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RUFY4Q6ZNE9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 OR5P1P-201ENST00000299512 925 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 SNORD113-7-201ENST00000363762 77 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 Y_RNA.326-201ENST00000365176 113 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 Y_RNA.419-201ENST00000384041 102 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 RPL23AP26-201ENST00000412728 464 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 RPL7L1P10-201ENST00000427790 463 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 AC024082.2-201ENST00000434771 238 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 RPL7L1P1-201ENST00000448259 785 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 RNU7-66P-201ENST00000459469 62 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 SNORD19B-201ENST00000459623 84 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 AC010631.1-201ENST00000474150 156 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 TRBV1-201ENST00000476502 284 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 SNORA31.9-201ENST00000516429 84 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 RNU4-60P-201ENST00000517239 135 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 AC109635.4-202ENST00000531666 412 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 AC025884.1-201ENST00000556034 378 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 BNIP3P22-201ENST00000593399 556 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 AC022432.1-201ENST00000595739 310 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 BNIP3P25-201ENST00000596023 559 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 AC012669.1-201ENST00000603209 283 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 uc_338.15-201ENST00000615470 191 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 MIR6891-201ENST00000618788 93 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RUFY4Q6ZNE9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 Y_RNA.167-201ENST00000363735 109 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 RNU6-946P-201ENST00000383878 107 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 SNORA70C-201ENST00000384538 135 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 RNU6-550P-201ENST00000391057 101 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC110754.1-201ENST00000399740 601 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 RNU2-43P-201ENST00000410306 190 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 MTCO2P27-201ENST00000420740 428 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC018644.1-201ENST00000429934 551 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC090774.1-201ENST00000435925 246 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC004866.2-201ENST00000438285 481 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 MTND4P19-201ENST00000446659 478 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 GAPDHP27-201ENST00000447427 1020 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms