Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 TOMM22P1-201ENST00000418578 312 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 DLGAP5P1-201ENST00000430307 464 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 snoU109.1-201ENST00000459339 135 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 RPL21P10-201ENST00000463521 490 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AC010401.1-201ENST00000463867 348 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 RPS4XP22-201ENST00000480755 780 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AC096751.1-202ENST00000502691 1067 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 RNU6-405P-201ENST00000516637 110 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 MTCYBP41-201ENST00000528913 1123 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AC011602.1-201ENST00000546484 331 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AC011611.1-201ENST00000552179 197 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AL845331.3-202ENST00000562856 261 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AC087481.2-201ENST00000565492 330 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AC011468.4-201ENST00000603942 409 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 NDUFA8P1-201ENST00000605525 367 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AC090425.2-201ENST00000608818 501 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 OR10AB1P-201ENST00000609613 938 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 TUG1_1.1-201ENST00000610654 145 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 AC009268.2-201ENST00000621925 457 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 RNA5SP197-201ENST00000363357 119 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 RNU4-75P-201ENST00000364621 146 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 MIR19A-201ENST00000384878 82 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 CCDC58P2-201ENST00000417131 366 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC233728.2-201ENST00000425348 757 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 MTND2P33-201ENST00000506452 1031 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 MIR2276-201ENST00000516886 89 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC007458.1-201ENST00000542812 373 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AL356432.3-201ENST00000568952 465 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC012182.1-201ENST00000570133 895 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 MIR4528-201ENST00000577763 90 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC146944.4-201ENST00000602697 718 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC079089.3-201ENST00000603094 673 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC015871.2-201ENST00000603605 948 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 SEPT7P9-203ENST00000604116 343 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 RNU6-87P-201ENST00000607561 108 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AP000254.1-201ENST00000609934 520 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 BX664608.1-201ENST00000610519 487 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC015967.1-201ENST00000619893 476 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 PLCE1P1-201ENST00000622094 305 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC098679.4-201ENST00000624241 654 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 AC116096.1-201ENST00000566804 2314 ntBASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SYNE3Q6ZMZ3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 RNA5SP295-201ENST00000362655 121 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 RNU6-1078P-201ENST00000364522 103 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC009961.2-201ENST00000435771 251 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 FTH1P1-201ENST00000437933 532 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 NPM1P49-201ENST00000448027 714 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC006539.3-201ENST00000454258 129 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 snoU13.24-201ENST00000458998 104 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 RPL31P13-201ENST00000484151 370 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC022483.1-201ENST00000514020 567 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 SNORA31.20-201ENST00000517111 133 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC103783.1-201ENST00000520506 373 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AP002453.2-201ENST00000533503 320 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC123904.2-201ENST00000548059 300 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 OR4T1P-201ENST00000554933 911 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AL157394.1-201ENST00000562983 1224 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 HMGN1P30-201ENST00000589286 268 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC078795.2-201ENST00000602835 1252 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms