Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AL031985.2-201ENST00000600955 480 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AL139344.1-201ENST00000605228 195 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AC004696.1-201ENST00000614345 607 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 AL355493.4-201ENST00000618530 292 ntBASIC3.15□□□□□ -1.91
CASC4Q6P4E1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.15□□□□□ -1.91
CASC4Q6P4E1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 RNA5SP252-201ENST00000391131 119 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 RNA5SP274-201ENST00000410484 108 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 UBE2FP1-201ENST00000416536 447 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC234781.2-201ENST00000426370 994 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AL356867.1-201ENST00000429623 299 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC097713.2-201ENST00000430199 356 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 OR2B8P-201ENST00000432841 938 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 RPL35AP22-201ENST00000436855 335 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 LARP1BP3-201ENST00000437229 869 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 MTND5P2-201ENST00000442927 1142 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 RPL7P36-201ENST00000444633 681 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC009237.8-201ENST00000445492 379 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 PRDX3P3-201ENST00000447765 522 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AP1S2P1-201ENST00000457344 379 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 RPS15AP36-201ENST00000492022 382 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 RNU6-1129P-201ENST00000515964 104 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 HMGN1P28-201ENST00000521340 364 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC124947.2-202ENST00000552735 133 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AP001004.1-201ENST00000582468 324 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AL353778.1-201ENST00000603149 408 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 ELOCP35-201ENST00000604289 336 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC091965.4-201ENST00000607691 587 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC093838.1-201ENST00000613014 469 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC100793.4-201ENST00000613683 429 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 MIR7975-201ENST00000619350 68 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AP000676.3-201ENST00000623299 569 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 U6.105-201ENST00000637379 88 ntBASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.14□□□□□ -1.91
CASC4Q6P4E1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.13□□□□□ -1.91
CASC4Q6P4E1 AP000568.1-201ENST00000282964 442 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CASC4Q6P4E1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CASC4Q6P4E1 SNORA14A-201ENST00000364773 135 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 SNORD15B-201ENST00000384714 146 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 YME1L1P1-201ENST00000429435 297 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.13□□□□□ -1.91
CASC4Q6P4E1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.13□□□□□ -1.91
CASC4Q6P4E1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.13□□□□□ -1.91
CASC4Q6P4E1 AL358232.1-201ENST00000448030 501 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 RN7SL863P-201ENST00000462370 296 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CASC4Q6P4E1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.13□□□□□ -1.91
CASC4Q6P4E1 RNU6-678P-201ENST00000516832 109 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.13□□□□□ -1.91
CASC4Q6P4E1 LRRC34P1-201ENST00000542742 915 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 AL355836.1-201ENST00000555951 870 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 MIR4307-201ENST00000582802 84 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 TPMTP1-201ENST00000592307 737 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 AC063944.3-201ENST00000609969 533 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 AL355816.2-201ENST00000610049 647 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 AC140725.3-201ENST00000616193 880 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 AC131159.1-201ENST00000621854 213 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 AC099506.2-201ENST00000623074 221 ntBASIC3.13□□□□□ -1.91
CASC4Q6P4E1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CASC4Q6P4E1 AC108206.1-201ENST00000570186 4159 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AC092435.3-201ENST00000565538 3654 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 SNORA71.3-201ENST00000362582 128 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 MIR19A-201ENST00000384878 82 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms