Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.53□□□□□ -1.68
KRT40Q6A162 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.53□□□□□ -1.68
KRT40Q6A162 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.53□□□□□ -1.68
KRT40Q6A162 AC019176.2-201ENST00000611579 315 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 DISC2.1-201ENST00000612827 205 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 AL442067.2-201ENST00000614033 363 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.53□□□□□ -1.68
KRT40Q6A162 AL159972.1-201ENST00000625150 448 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 AC074029.4-201ENST00000624796 1859 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRT40Q6A162 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
KRT40Q6A162 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.53□□□□□ -1.68
KRT40Q6A162 AC009902.3-201ENST00000606235 2172 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KRT40Q6A162 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
KRT40Q6A162 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.52□□□□□ -1.69
KRT40Q6A162 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KRT40Q6A162 AC006020.1-201ENST00000420179 1854 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRT40Q6A162 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
KRT40Q6A162 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KRT40Q6A162 AC011460.1-201ENST00000636268 1834 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KRT40Q6A162 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 RNU6-97P-201ENST00000363387 104 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 Y_RNA.166-201ENST00000363730 102 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
KRT40Q6A162 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.52□□□□□ -1.69
KRT40Q6A162 AL391219.1-201ENST00000422570 483 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 RPS12P5-201ENST00000423449 371 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.52□□□□□ -1.69
KRT40Q6A162 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.52□□□□□ -1.69
KRT40Q6A162 TIMM9P1-201ENST00000436122 256 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
KRT40Q6A162 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.52□□□□□ -1.69
KRT40Q6A162 snoU13.8-201ENST00000458890 104 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 AC069499.1-201ENST00000489433 509 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 HSPD1P15-201ENST00000505573 1122 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.52□□□□□ -1.69
KRT40Q6A162 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.52□□□□□ -1.69
KRT40Q6A162 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.52□□□□□ -1.69
KRT40Q6A162 SUB1P1-201ENST00000524415 382 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.52□□□□□ -1.69
KRT40Q6A162 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.52□□□□□ -1.69
KRT40Q6A162 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.52□□□□□ -1.69
KRT40Q6A162 AC090615.1-201ENST00000577519 154 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.52□□□□□ -1.69
KRT40Q6A162 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.52□□□□□ -1.69
KRT40Q6A162 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.52□□□□□ -1.69
KRT40Q6A162 AC010525.2-201ENST00000590920 195 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 AC025588.3-201ENST00000604182 274 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 AC010680.3-201ENST00000604215 520 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 AC005034.5-201ENST00000604219 466 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 uc_338.12-201ENST00000616344 181 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 AC112204.3-201ENST00000623822 332 ntBASIC4.52□□□□□ -1.69
KRT40Q6A162 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.52□□□□□ -1.69
KRT40Q6A162 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.52□□□□□ -1.69
KRT40Q6A162 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.52□□□□□ -1.69
KRT40Q6A162 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
KRT40Q6A162 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
KRT40Q6A162 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
KRT40Q6A162 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.52□□□□□ -1.69
KRT40Q6A162 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRT40Q6A162 RIOK3P1-201ENST00000418778 1528 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
KRT40Q6A162 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRT40Q6A162 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.51□□□□□ -1.69
KRT40Q6A162 AC090971.4-201ENST00000560291 1800 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
KRT40Q6A162 ZNF285B-201ENST00000561698 1767 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRT40Q6A162 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.51□□□□□ -1.69
KRT40Q6A162 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRT40Q6A162 RNU4-79P-201ENST00000362764 141 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 Y_RNA.394-201ENST00000383942 103 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 RNU6-39P-201ENST00000384344 107 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 RPS26P47-201ENST00000427219 348 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 AL356535.1-201ENST00000440335 398 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 AL162388.1-201ENST00000450912 352 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 AL353691.1-201ENST00000451332 387 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.51□□□□□ -1.69
KRT40Q6A162 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.51□□□□□ -1.69
KRT40Q6A162 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.51□□□□□ -1.69
KRT40Q6A162 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.51□□□□□ -1.69
KRT40Q6A162 AC112206.3-201ENST00000514578 389 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 PSMA2P1-201ENST00000526365 646 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 AC023050.3-201ENST00000541142 333 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 AC098848.2-201ENST00000588023 330 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.51□□□□□ -1.69
KRT40Q6A162 AC068790.3-201ENST00000602988 553 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 YWHAQP7-201ENST00000603536 658 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.51□□□□□ -1.69
KRT40Q6A162 AC004853.1-201ENST00000604902 698 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.51□□□□□ -1.69
KRT40Q6A162 AL050343.2-201ENST00000607338 280 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 OR6R2P-201ENST00000609216 300 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 AL354798.1-201ENST00000622505 329 ntBASIC4.51□□□□□ -1.69
KRT40Q6A162 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.51□□□□□ -1.69
KRT40Q6A162 AC100810.6-201ENST00000638068 285 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms