Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RNU6-582P-201ENST00000362989 107 ntBASIC1.84□□□□□ -2.11
CDC42BPAQ5VT25 MED6P1-201ENST00000439659 713 ntBASIC1.84□□□□□ -2.11
CDC42BPAQ5VT25 RPS29P1-201ENST00000465274 159 ntBASIC1.84□□□□□ -2.11
CDC42BPAQ5VT25 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.84□□□□□ -2.11
CDC42BPAQ5VT25 AC009901.1-201ENST00000506703 541 ntBASIC1.84□□□□□ -2.11
CDC42BPAQ5VT25 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.84□□□□□ -2.11
CDC42BPAQ5VT25 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.84□□□□□ -2.11
CDC42BPAQ5VT25 MTCO1P40-201ENST00000574371 625 ntBASIC1.84□□□□□ -2.11
CDC42BPAQ5VT25 AC083806.3-201ENST00000614016 455 ntBASIC1.84□□□□□ -2.11
CDC42BPAQ5VT25 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CDC42BPAQ5VT25 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 AC106901.1-201ENST00000425086 698 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 CKS1BP5-201ENST00000434172 273 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 RPS3AP22-201ENST00000488297 769 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 SUMO2P6-201ENST00000505273 288 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 AC073413.2-201ENST00000604332 360 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 Y_RNA.112-201ENST00000363250 102 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 AC016769.3-201ENST00000396562 315 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 RPS3AP44-201ENST00000425466 790 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 FABP5P3-201ENST00000437960 408 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 RPS27P21-201ENST00000486977 252 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 RNU6-1223P-201ENST00000517124 104 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 RNU1-104P-201ENST00000517280 175 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 AC019176.1-201ENST00000518519 225 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 MIR151B-201ENST00000584249 96 ntBASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CDC42BPAQ5VT25 CDC27P3-201ENST00000635418 1910 ntBASIC1.82□□□□□ -2.12
CDC42BPAQ5VT25 RN7SKP51-201ENST00000410781 304 ntBASIC1.82□□□□□ -2.12
CDC42BPAQ5VT25 VN1R108P-201ENST00000431580 830 ntBASIC1.82□□□□□ -2.12
CDC42BPAQ5VT25 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.82□□□□□ -2.12
CDC42BPAQ5VT25 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.82□□□□□ -2.12
CDC42BPAQ5VT25 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.82□□□□□ -2.12
CDC42BPAQ5VT25 AC023790.1-201ENST00000482174 347 ntBASIC1.82□□□□□ -2.12
CDC42BPAQ5VT25 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.82□□□□□ -2.12
CDC42BPAQ5VT25 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.82□□□□□ -2.12
CDC42BPAQ5VT25 AL161722.3-201ENST00000605789 2983 ntBASIC1.82□□□□□ -2.12
CDC42BPAQ5VT25 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 AC098583.1-201ENST00000480875 255 ntBASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 MTCYBP35-201ENST00000503630 1137 ntBASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 AC022634.1-201ENST00000520765 532 ntBASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 AL137100.2-201ENST00000555786 315 ntBASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 MIR6779-201ENST00000617283 64 ntBASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 AC091895.1-201ENST00000624494 256 ntBASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.81□□□□□ -2.12
CDC42BPAQ5VT25 RNU4-91P-201ENST00000364778 135 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 RNA5SP189-201ENST00000364920 115 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 HMGB3P21-201ENST00000452483 547 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 HMGN2P13-201ENST00000476476 274 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 GLUD1P4-201ENST00000590914 418 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 AC008962.1-201ENST00000605729 304 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 AC130650.2-201ENST00000618736 2403 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 UBE2V1P5-201ENST00000440070 405 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 AC087343.1-201ENST00000477341 475 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 HMGB3P17-201ENST00000504195 649 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 SNORD59.2-201ENST00000516873 68 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 IGKV2D-36-201ENST00000518643 226 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 AP003117.1-201ENST00000602771 554 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 AC106028.5-201ENST00000610332 395 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 AC006338.1-201ENST00000618453 749 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 MIR6788-201ENST00000618842 66 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 PVT1_3.1-201ENST00000620853 95 ntBASIC1.8□□□□□ -2.12
CDC42BPAQ5VT25 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.79□□□□□ -2.12
CDC42BPAQ5VT25 HMGB1P5-201ENST00000255320 642 ntBASIC1.79□□□□□ -2.12
CDC42BPAQ5VT25 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CDC42BPAQ5VT25 OR1L1-202ENST00000373686 1083 ntBASIC1.79□□□□□ -2.12
CDC42BPAQ5VT25 RNU6-997P-201ENST00000384725 107 ntBASIC1.79□□□□□ -2.12
CDC42BPAQ5VT25 MIR222-201ENST00000384992 110 ntBASIC1.79□□□□□ -2.12
CDC42BPAQ5VT25 PGBD4P6-201ENST00000421501 610 ntBASIC1.79□□□□□ -2.12
CDC42BPAQ5VT25 ATG12P2-201ENST00000456830 416 ntBASIC1.79□□□□□ -2.12
CDC42BPAQ5VT25 AP000907.2-201ENST00000530827 353 ntBASIC1.79□□□□□ -2.12
CDC42BPAQ5VT25 MIR4458-201ENST00000578872 75 ntBASIC1.79□□□□□ -2.12
CDC42BPAQ5VT25 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.79□□□□□ -2.12
CDC42BPAQ5VT25 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDC42BPAQ5VT25 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.78□□□□□ -2.12
CDC42BPAQ5VT25 AC135776.4-201ENST00000624300 1904 ntBASIC1.78□□□□□ -2.12
CDC42BPAQ5VT25 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
CDC42BPAQ5VT25 SDCBPP1-201ENST00000440192 890 ntBASIC1.78□□□□□ -2.12
CDC42BPAQ5VT25 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.78□□□□□ -2.12
CDC42BPAQ5VT25 snoU13.3-201ENST00000459441 104 ntBASIC1.78□□□□□ -2.12
CDC42BPAQ5VT25 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.78□□□□□ -2.12
CDC42BPAQ5VT25 SETP7-201ENST00000552169 453 ntBASIC1.78□□□□□ -2.12
CDC42BPAQ5VT25 AC116447.1-201ENST00000613153 453 ntBASIC1.78□□□□□ -2.12
CDC42BPAQ5VT25 MIR6515-201ENST00000619843 57 ntBASIC1.78□□□□□ -2.12
CDC42BPAQ5VT25 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms