Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 U8.1-201ENST00000362843 134 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 RNU6-1080P-201ENST00000383982 107 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 RNU6-1032P-201ENST00000384100 107 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 MIR153-1-201ENST00000384914 90 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
NUP188Q5SRE5 Z85995.1-201ENST00000415547 335 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 AL357078.2-201ENST00000416486 427 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 AL354695.1-201ENST00000427935 228 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 HMGB1P26-201ENST00000452520 628 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.9□□□□□ -2.11
NUP188Q5SRE5 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.9□□□□□ -2.11
NUP188Q5SRE5 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.9□□□□□ -2.11
NUP188Q5SRE5 MIR3690-201ENST00000580266 75 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 MIR3660-201ENST00000584845 100 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 FAM106DP-201ENST00000586416 501 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 BNIP3P4-201ENST00000604946 565 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 uc_338.12-201ENST00000616344 181 ntBASIC1.9□□□□□ -2.11
NUP188Q5SRE5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
NUP188Q5SRE5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NUP188Q5SRE5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NUP188Q5SRE5 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NUP188Q5SRE5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.89□□□□□ -2.11
NUP188Q5SRE5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.89□□□□□ -2.11
NUP188Q5SRE5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.89□□□□□ -2.11
NUP188Q5SRE5 GTF2IP7-202ENST00000436677 309 ntBASIC1.89□□□□□ -2.11
NUP188Q5SRE5 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.89□□□□□ -2.11
NUP188Q5SRE5 AC096992.1-201ENST00000459808 709 ntBASIC1.89□□□□□ -2.11
NUP188Q5SRE5 AC090096.1-201ENST00000489168 390 ntBASIC1.89□□□□□ -2.11
NUP188Q5SRE5 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.89□□□□□ -2.11
NUP188Q5SRE5 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.89□□□□□ -2.11
NUP188Q5SRE5 AL592494.3-201ENST00000609485 464 ntBASIC1.89□□□□□ -2.11
NUP188Q5SRE5 MKKS-204ENST00000639674 192 ntBASIC1.89□□□□□ -2.11
NUP188Q5SRE5 AC011477.1-204ENST00000623416 1325 ntBASIC1.89□□□□□ -2.11
NUP188Q5SRE5 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 FO393413.1-201ENST00000402892 195 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC244033.1-201ENST00000426826 870 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 Z96811.1-201ENST00000445880 108 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 SNORD121B-201ENST00000458838 81 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC021146.8-201ENST00000507455 733 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 SYF2P1-201ENST00000550658 413 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC091895.1-201ENST00000624494 256 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 CUL4AP1-201ENST00000514750 1863 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 RPL31P2-201ENST00000413849 377 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 RPS6P15-201ENST00000431996 751 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC010627.1-201ENST00000503819 1294 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 MTCO2P32-201ENST00000514865 403 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AC068135.2-201ENST00000569293 1028 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.88□□□□□ -2.11
NUP188Q5SRE5 MIR203B-201ENST00000636080 86 ntBASIC1.88□□□□□ -2.11
NUP188Q5SRE5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
NUP188Q5SRE5 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.87□□□□□ -2.11
NUP188Q5SRE5 AP002907.1-201ENST00000606361 1430 ntBASIC1.87□□□□□ -2.11
NUP188Q5SRE5 RNU6-1180P-201ENST00000364935 107 ntBASIC1.87□□□□□ -2.11
NUP188Q5SRE5 MIR520E-201ENST00000384867 87 ntBASIC1.87□□□□□ -2.11
NUP188Q5SRE5 RNU2-32P-201ENST00000411193 191 ntBASIC1.87□□□□□ -2.11
NUP188Q5SRE5 RPL23AP41-201ENST00000484754 458 ntBASIC1.87□□□□□ -2.11
NUP188Q5SRE5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.87□□□□□ -2.11
NUP188Q5SRE5 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.87□□□□□ -2.11
NUP188Q5SRE5 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.87□□□□□ -2.11
NUP188Q5SRE5 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
NUP188Q5SRE5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
NUP188Q5SRE5 SNORD114-27-201ENST00000363766 70 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 PRELID3BP11-201ENST00000414230 479 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 HMGN2P38-201ENST00000423806 265 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 AC093084.1-201ENST00000424233 687 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.86□□□□□ -2.11
NUP188Q5SRE5 RPL17P49-201ENST00000443728 411 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 HMGN2P18-201ENST00000450680 270 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 AC008427.1-201ENST00000503102 655 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 AC096571.1-202ENST00000506634 735 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 OR5AQ1P-201ENST00000527596 927 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.86□□□□□ -2.11
NUP188Q5SRE5 AC090740.1-201ENST00000623193 2262 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NUP188Q5SRE5 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NUP188Q5SRE5 RNU2-71P-201ENST00000411395 189 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 MTND4LP21-201ENST00000415303 295 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.86□□□□□ -2.11
NUP188Q5SRE5 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NUP188Q5SRE5 HSFY3P-201ENST00000444242 1191 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 AC146507.1-201ENST00000468335 354 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 AC093281.2-201ENST00000510153 597 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 MTCO3P44-201ENST00000510977 541 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.86□□□□□ -2.11
NUP188Q5SRE5 AC097504.2-201ENST00000608088 454 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 AC145207.9-201ENST00000623802 325 ntBASIC1.86□□□□□ -2.11
NUP188Q5SRE5 CKS1BP5-201ENST00000434172 273 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms