Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AL121603.1-201ENST00000553815 142 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 ANP32BP3-201ENST00000559213 706 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 HMGB1P33-201ENST00000563485 527 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC090616.5-202ENST00000582111 297 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC008752.3-201ENST00000588113 712 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AL117336.2-201ENST00000602435 335 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AL391646.1-201ENST00000603860 190 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC007179.3-201ENST00000604976 235 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC008277.2-201ENST00000605196 797 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AP001330.5-201ENST00000607176 411 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC004908.2-201ENST00000609090 574 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AL353748.2-201ENST00000622148 471 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC092326.2-201ENST00000624772 1561 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 ZNF285B-201ENST00000561698 1767 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 CBX3P1-201ENST00000325243 554 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 RNU6-534P-201ENST00000364877 106 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 HMGN1P24-201ENST00000412282 298 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 AC002486.1-201ENST00000435098 391 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 TBCAP1-201ENST00000436520 327 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 MTND4LP16-201ENST00000440828 295 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 AC132479.1-201ENST00000449160 144 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 MTND1P9-201ENST00000453775 944 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 RN7SL323P-201ENST00000494712 295 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 NIPA2P2-201ENST00000496376 1083 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 AC068305.1-201ENST00000497406 726 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 HMGB1P29-201ENST00000505659 499 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 RNU1-95P-201ENST00000516357 160 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 RNU1-128P-201ENST00000516704 160 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 MTND1P35-201ENST00000526739 508 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 DEFB108D-201ENST00000527787 222 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 CYCSP30-201ENST00000546447 172 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 MIR6868-201ENST00000611215 58 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 AL020991.1-201ENST00000612314 373 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 AL391261.4-201ENST00000616012 481 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 FP236240.3-201ENST00000623061 327 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 AC009093.8-201ENST00000641769 292 ntBASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC44A4Q53GD3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 Y_RNA.1-201ENST00000352915 104 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 RNU6-169P-201ENST00000365336 107 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 RNU6-483P-201ENST00000384088 108 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 RNU6-432P-201ENST00000384196 109 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 SNORA9-201ENST00000384215 133 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 MIR483-201ENST00000385070 76 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 Z98941.1-201ENST00000407764 100 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 USP9YP27-201ENST00000418455 438 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 RBMY1KP-201ENST00000423480 476 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AC012498.1-201ENST00000424037 437 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 TIMM9P3-201ENST00000428659 274 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AC091286.1-201ENST00000431233 461 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 RPL23AP30-201ENST00000432419 501 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 RPS3AP12-201ENST00000443616 753 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 MTND1P11-201ENST00000456661 876 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 RNU7-59P-201ENST00000459101 61 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AP000852.1-201ENST00000472460 573 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AC007182.2-201ENST00000489251 402 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AC025465.4-201ENST00000513422 638 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AC026403.1-201ENST00000518938 295 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms