Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.56□□□□□ -2
PTPN20Q4JDL3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.56□□□□□ -2
PTPN20Q4JDL3 AC004486.1-201ENST00000546846 233 ntBASIC2.56□□□□□ -2
PTPN20Q4JDL3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.56□□□□□ -2
PTPN20Q4JDL3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.56□□□□□ -2
PTPN20Q4JDL3 MIR4672-201ENST00000583126 81 ntBASIC2.56□□□□□ -2
PTPN20Q4JDL3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.56□□□□□ -2
PTPN20Q4JDL3 AC006023.1-201ENST00000603944 259 ntBASIC2.56□□□□□ -2
PTPN20Q4JDL3 AL138478.1-201ENST00000612252 832 ntBASIC2.56□□□□□ -2
PTPN20Q4JDL3 AL158163.2-201ENST00000619110 700 ntBASIC2.56□□□□□ -2
PTPN20Q4JDL3 AC080100.1-201ENST00000624239 5356 ntBASIC2.56□□□□□ -2
PTPN20Q4JDL3 OR4G11P-202ENST00000642116 1414 ntBASIC2.56□□□□□ -2
PTPN20Q4JDL3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PTPN20Q4JDL3 U8.8-201ENST00000365399 135 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 RNU6-198P-201ENST00000384258 104 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 SNORA41-201ENST00000384675 132 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 MIR135A2-201ENST00000384854 100 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 RNU6-1197P-201ENST00000391183 107 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 RNU2-47P-201ENST00000410649 186 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.55□□□□□ -2
PTPN20Q4JDL3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.55□□□□□ -2
PTPN20Q4JDL3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.55□□□□□ -2
PTPN20Q4JDL3 AL590233.1-201ENST00000430017 456 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC092427.1-201ENST00000439177 601 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.55□□□□□ -2
PTPN20Q4JDL3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC104982.1-201ENST00000478775 574 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 KC877373.1-201ENST00000479066 408 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC069528.1-202ENST00000482888 637 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.55□□□□□ -2
PTPN20Q4JDL3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.55□□□□□ -2
PTPN20Q4JDL3 AL136360.1-201ENST00000503377 1900 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC097714.1-201ENST00000511272 1647 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC112206.4-201ENST00000515142 405 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC010376.1-201ENST00000522101 334 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.55□□□□□ -2
PTPN20Q4JDL3 SLC2A13P1-201ENST00000531560 322 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 OR5BN1P-201ENST00000532955 829 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC009812.4-201ENST00000569134 1805 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 VN1R83P-201ENST00000595685 445 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC097504.2-201ENST00000608088 454 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC018645.2-201ENST00000609151 472 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 AL121895.2-201ENST00000619558 447 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 CDR1-202ENST00000625883 1485 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 AC243829.7-201ENST00000633081 225 ntBASIC2.55□□□□□ -2
PTPN20Q4JDL3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.55□□□□□ -2
PTPN20Q4JDL3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.55□□□□□ -2
PTPN20Q4JDL3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC010680.1-201ENST00000590024 3590 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 MIR21-201ENST00000362134 72 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 RNU5E-10P-201ENST00000363506 118 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 RNU6-1176P-201ENST00000390955 107 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 DHFRP6-201ENST00000401776 268 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 HMGB1P17-201ENST00000403495 628 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 RPL27AP8-201ENST00000424277 446 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC005297.2-201ENST00000450430 606 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 OFD1P3Y-201ENST00000453312 783 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 AIG1P1-201ENST00000503376 148 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 HMGB1P28-201ENST00000507778 552 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 CR383656.7-201ENST00000548164 174 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC090616.3-201ENST00000582184 217 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC103810.6-201ENST00000606708 136 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC080013.4-201ENST00000607624 649 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC067747.1-201ENST00000608026 250 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC084824.4-201ENST00000620106 731 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AL049777.1-201ENST00000622740 518 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC079597.1-201ENST00000624306 508 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC068880.5-201ENST00000624331 290 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 MIR1291-201ENST00000627649 87 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
PTPN20Q4JDL3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PTPN20Q4JDL3 AC016717.2-201ENST00000609089 5141 ntBASIC2.54□□□□□ -2
PTPN20Q4JDL3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
PTPN20Q4JDL3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
PTPN20Q4JDL3 FRG1BP-201ENST00000278882 761 ntBASIC2.53□□□□□ -2
PTPN20Q4JDL3 MIR627-201ENST00000384979 97 ntBASIC2.53□□□□□ -2
PTPN20Q4JDL3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.53□□□□□ -2
PTPN20Q4JDL3 AL356131.1-201ENST00000405826 414 ntBASIC2.53□□□□□ -2
PTPN20Q4JDL3 MRPS36P1-201ENST00000421291 307 ntBASIC2.53□□□□□ -2
PTPN20Q4JDL3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.53□□□□□ -2
PTPN20Q4JDL3 AC019178.2-201ENST00000423595 505 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms