Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SMARCB1Q12824 AL035411.2-201ENST00000604022 421 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 DPRXP5-201ENST00000604662 539 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 RNU4-5P-201ENST00000607255 135 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 OR1S1-201ENST00000624470 978 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.67□□□□□ -1.98
SMARCB1Q12824 GDI2P1-201ENST00000429312 1336 ntBASIC2.67□□□□□ -1.98
SMARCB1Q12824 AC026241.1-201ENST00000517873 2142 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMARCB1Q12824 ZNF29P-201ENST00000225587 168 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 RNA5SP393-201ENST00000363423 117 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 RNA5SP126-201ENST00000365092 109 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 SNORA36C-201ENST00000384289 132 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 MIR592-201ENST00000384959 97 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AL359511.1-201ENST00000402970 211 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 RNA5SP38-201ENST00000410750 119 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AC080125.1-201ENST00000414888 684 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.66□□□□□ -1.98
SMARCB1Q12824 AL513175.2-201ENST00000422071 443 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 PSMA6P3-201ENST00000428242 164 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AC129850.1-201ENST00000436203 508 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.66□□□□□ -1.98
SMARCB1Q12824 AC104389.3-201ENST00000445629 235 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AC108734.3-201ENST00000481241 1165 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AC134050.1-201ENST00000495088 933 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 MTCYBP17-201ENST00000503579 789 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 TMEM251P1-201ENST00000503717 318 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AC113347.3-201ENST00000509113 148 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AC010625.1-201ENST00000511296 403 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 RNA5SP24-201ENST00000516478 95 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
SMARCB1Q12824 HMGB1P41-201ENST00000520234 440 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.66□□□□□ -1.98
SMARCB1Q12824 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.66□□□□□ -1.98
SMARCB1Q12824 AC023813.2-201ENST00000564321 469 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 MIR3670-2-201ENST00000582974 65 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 MIR3670-1-201ENST00000584160 65 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 MIR3670-3-201ENST00000584855 65 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AL355812.1-201ENST00000603215 216 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AC069304.2-201ENST00000605154 435 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AC024560.3-201ENST00000608482 349 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 MIR3670-4-201ENST00000612260 65 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AL355810.1-201ENST00000614629 552 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 AL360181.4-201ENST00000621752 134 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 MIR1322-201ENST00000638013 71 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SMARCB1Q12824 SGO1P2-201ENST00000429458 1589 ntBASIC2.66□□□□□ -1.98
SMARCB1Q12824 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
SMARCB1Q12824 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SMARCB1Q12824 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SMARCB1Q12824 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SMARCB1Q12824 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.65□□□□□ -1.99
SMARCB1Q12824 MIR518C-201ENST00000384822 101 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 RNA5SP508-201ENST00000411327 119 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 RPS3AP37-201ENST00000419176 745 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SMARCB1Q12824 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.65□□□□□ -1.99
SMARCB1Q12824 MRPL50P4-201ENST00000446432 475 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 MTND2P19-201ENST00000449129 1012 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 AC005297.2-201ENST00000450430 606 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SMARCB1Q12824 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.65□□□□□ -1.99
SMARCB1Q12824 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.65□□□□□ -1.99
SMARCB1Q12824 RPL23AP45-201ENST00000476406 468 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 RN7SL429P-201ENST00000479090 223 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 RN7SL489P-201ENST00000486185 223 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 RN7SL327P-201ENST00000488659 223 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 HMGB1P28-201ENST00000507778 552 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.65□□□□□ -1.99
SMARCB1Q12824 AC109329.2-201ENST00000519658 482 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SMARCB1Q12824 SLC2A13P1-201ENST00000531560 322 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.65□□□□□ -1.99
SMARCB1Q12824 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.65□□□□□ -1.99
SMARCB1Q12824 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.65□□□□□ -1.99
SMARCB1Q12824 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.65□□□□□ -1.99
SMARCB1Q12824 MTCYBP23-201ENST00000558717 1102 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 AL132657.2-201ENST00000564417 358 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 RPL23AP84-201ENST00000571193 464 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.65□□□□□ -1.99
SMARCB1Q12824 BNIP3P24-201ENST00000593398 557 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 AC011458.1-201ENST00000604034 617 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 AC107075.1-201ENST00000613695 314 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 RN7SL853P-201ENST00000617250 223 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 AL590808.1-201ENST00000618696 141 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 AC095031.1-201ENST00000623685 672 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.65□□□□□ -1.99
SMARCB1Q12824 AC090740.1-201ENST00000623193 2262 ntBASIC2.65□□□□□ -1.99
SMARCB1Q12824 ELF2P3-201ENST00000445099 1506 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.64□□□□□ -1.99
SMARCB1Q12824 AC004944.1-201ENST00000517807 3059 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMARCB1Q12824 SNORD51-201ENST00000384320 80 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 RNU6-925P-201ENST00000384629 104 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 ERHP2-201ENST00000402323 299 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 AL356057.2-201ENST00000403318 432 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 RNU2-15P-201ENST00000410692 191 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 RPL7P30-201ENST00000420888 709 ntBASIC2.64□□□□□ -1.99
SMARCB1Q12824 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms