Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU6-657P-201ENST00000383904 107 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 Y_RNA.493-201ENST00000384422 102 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 MT-TC-201ENST00000387405 66 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 RPL23AP29-201ENST00000397284 453 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 MIR1284-201ENST00000408337 120 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 MIR1289-1-201ENST00000408836 144 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CKAP4Q07065 RNA5SP38-201ENST00000410750 119 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 RPL19P1-201ENST00000411635 428 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 AC080125.1-201ENST00000414888 684 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 RPL36AP36-201ENST00000418616 301 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 USP9YP20-201ENST00000419224 558 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.71□□□□□ -1.98
CKAP4Q07065 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.71□□□□□ -1.98
CKAP4Q07065 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.71□□□□□ -1.98
CKAP4Q07065 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.71□□□□□ -1.98
CKAP4Q07065 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.71□□□□□ -1.98
CKAP4Q07065 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.71□□□□□ -1.98
CKAP4Q07065 MTCO1P48-201ENST00000448024 1096 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 MTCO3P2-201ENST00000457365 171 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 RPL30P6-201ENST00000475925 342 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 AC068587.1-201ENST00000483613 781 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.71□□□□□ -1.98
CKAP4Q07065 AC005178.1-201ENST00000508392 440 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.71□□□□□ -1.98
CKAP4Q07065 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.71□□□□□ -1.98
CKAP4Q07065 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.71□□□□□ -1.98
CKAP4Q07065 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.71□□□□□ -1.98
CKAP4Q07065 DNAJC8P1-201ENST00000554535 372 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.71□□□□□ -1.98
CKAP4Q07065 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.71□□□□□ -1.98
CKAP4Q07065 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.71□□□□□ -1.98
CKAP4Q07065 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.71□□□□□ -1.98
CKAP4Q07065 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.71□□□□□ -1.98
CKAP4Q07065 AP000811.1-201ENST00000603803 651 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 AC006270.3-201ENST00000605967 1036 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 AC064807.4-201ENST00000607201 407 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 AC122133.1-201ENST00000613964 233 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 AC092650.2-201ENST00000619984 902 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 AL607023.1-201ENST00000620045 248 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.71□□□□□ -1.98
CKAP4Q07065 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CKAP4Q07065 AC004777.1-201ENST00000624317 287 ntBASIC2.71□□□□□ -1.98
CKAP4Q07065 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CKAP4Q07065 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CKAP4Q07065 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.71□□□□□ -1.98
CKAP4Q07065 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CKAP4Q07065 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CKAP4Q07065 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.71□□□□□ -1.98
CKAP4Q07065 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CKAP4Q07065 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.7□□□□□ -1.98
CKAP4Q07065 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.7□□□□□ -1.98
CKAP4Q07065 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.7□□□□□ -1.98
CKAP4Q07065 ZNF734P-201ENST00000419494 1534 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CKAP4Q07065 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CKAP4Q07065 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CKAP4Q07065 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CKAP4Q07065 RNU2-28P-201ENST00000410457 189 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 RNU4-78P-201ENST00000410940 126 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 AL133384.1-201ENST00000412744 351 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 MTCYBP38-201ENST00000417160 1123 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.7□□□□□ -1.98
CKAP4Q07065 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.7□□□□□ -1.98
CKAP4Q07065 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.7□□□□□ -1.98
CKAP4Q07065 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CKAP4Q07065 NIPA2P1-201ENST00000426223 976 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.7□□□□□ -1.98
CKAP4Q07065 AC091390.1-201ENST00000433904 331 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CKAP4Q07065 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.7□□□□□ -1.98
CKAP4Q07065 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.7□□□□□ -1.98
CKAP4Q07065 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CKAP4Q07065 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.7□□□□□ -1.98
CKAP4Q07065 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.7□□□□□ -1.98
CKAP4Q07065 USP9YP10-201ENST00000454868 628 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 RN7SL807P-201ENST00000470923 297 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 MTND3P7-201ENST00000474435 343 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.7□□□□□ -1.98
CKAP4Q07065 XKRY-201ENST00000510392 1100 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.7□□□□□ -1.98
CKAP4Q07065 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.7□□□□□ -1.98
CKAP4Q07065 RNU6-583P-201ENST00000516012 92 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 RNA5SP282-201ENST00000516355 108 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 RNU6-759P-201ENST00000516740 103 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 DUXAP2-201ENST00000519198 589 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 ERHP1-201ENST00000523006 310 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.7□□□□□ -1.98
CKAP4Q07065 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CKAP4Q07065 AL512347.1-201ENST00000566420 503 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.7□□□□□ -1.98
CKAP4Q07065 AP005136.1-201ENST00000579765 429 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 AC010738.1-201ENST00000604970 987 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 HSPE1P14-201ENST00000605812 302 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.7□□□□□ -1.98
CKAP4Q07065 AC009090.3-201ENST00000616553 565 ntBASIC2.7□□□□□ -1.98
CKAP4Q07065 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.7□□□□□ -1.98
CKAP4Q07065 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.7□□□□□ -1.98
CKAP4Q07065 AL445523.1-201ENST00000451184 1362 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms