Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.18□□□□□ -1.9
GABPAQ06546 MTND5P27-201ENST00000428871 1720 ntBASIC3.18□□□□□ -1.9
GABPAQ06546 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.18□□□□□ -1.9
GABPAQ06546 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.17□□□□□ -1.9
GABPAQ06546 AL161781.1-201ENST00000354277 403 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 SNORD113-6-201ENST00000363345 75 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 RNU6-1214P-201ENST00000363650 109 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 Y_RNA.234-201ENST00000364409 97 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 RNU6-882P-201ENST00000391025 103 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 MIR320C1-201ENST00000408566 88 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.17□□□□□ -1.9
GABPAQ06546 AC083875.1-201ENST00000419509 405 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 TXNL1P1-201ENST00000429528 554 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.17□□□□□ -1.9
GABPAQ06546 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.17□□□□□ -1.9
GABPAQ06546 AC234775.1-201ENST00000454247 670 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.17□□□□□ -1.9
GABPAQ06546 AC104563.1-201ENST00000476147 376 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.17□□□□□ -1.9
GABPAQ06546 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.17□□□□□ -1.9
GABPAQ06546 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GABPAQ06546 AC104685.1-201ENST00000502445 371 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.17□□□□□ -1.9
GABPAQ06546 AC147055.4-201ENST00000504399 745 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 CBX3P3-201ENST00000508108 532 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
GABPAQ06546 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
GABPAQ06546 RNA5SP282-201ENST00000516355 108 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 RNU6-714P-201ENST00000516963 103 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 AC103783.1-201ENST00000520506 373 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
GABPAQ06546 AL163153.1-201ENST00000554223 283 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.17□□□□□ -1.9
GABPAQ06546 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.17□□□□□ -1.9
GABPAQ06546 MIR3605-201ENST00000583214 100 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 AP001029.3-201ENST00000588063 596 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 AC011451.2-201ENST00000604303 598 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 AC093424.1-201ENST00000604999 338 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 RNU6-88P-201ENST00000606801 100 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 AC116096.1-201ENST00000566804 2314 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
GABPAQ06546 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.17□□□□□ -1.9
GABPAQ06546 AC108206.1-201ENST00000570186 4159 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GABPAQ06546 AL359693.1-201ENST00000614959 2407 ntBASIC3.17□□□□□ -1.9
GABPAQ06546 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GABPAQ06546 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
GABPAQ06546 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
GABPAQ06546 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.16□□□□□ -1.9
GABPAQ06546 FRG1BP-201ENST00000278882 761 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 AL672167.1-206ENST00000356293 943 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 RNU6-1207P-201ENST00000384343 107 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.16□□□□□ -1.9
GABPAQ06546 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 AC010099.3-201ENST00000423896 409 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 BX119904.4-201ENST00000424402 301 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 MTCYBP34-201ENST00000439552 670 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.16□□□□□ -1.9
GABPAQ06546 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.16□□□□□ -1.9
GABPAQ06546 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.16□□□□□ -1.9
GABPAQ06546 RPL30P9-201ENST00000465586 330 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 AC092185.1-201ENST00000491371 97 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.16□□□□□ -1.9
GABPAQ06546 AC024589.1-201ENST00000512207 263 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 RN7SKP287-201ENST00000516546 266 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 SNORA31.21-201ENST00000517180 77 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.16□□□□□ -1.9
GABPAQ06546 UBTFL10-201ENST00000528532 562 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 AC023538.1-201ENST00000534576 736 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 TRAV37-201ENST00000553906 342 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 OR4T1P-201ENST00000554933 911 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 MED28P6-201ENST00000558776 231 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.16□□□□□ -1.9
GABPAQ06546 BDH2P1-201ENST00000602288 736 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 AC008277.2-201ENST00000605196 797 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.16□□□□□ -1.9
GABPAQ06546 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.16□□□□□ -1.9
GABPAQ06546 AC021755.4-201ENST00000616620 456 ntBASIC3.16□□□□□ -1.9
GABPAQ06546 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
GABPAQ06546 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.16□□□□□ -1.9
GABPAQ06546 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
GABPAQ06546 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
GABPAQ06546 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
GABPAQ06546 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
GABPAQ06546 RNU4-82P-201ENST00000362443 140 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 RNU6-462P-201ENST00000362659 105 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 RNU6-97P-201ENST00000363387 104 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 RNU6-931P-201ENST00000363850 107 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 RNA5SP68-201ENST00000363885 119 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 RNU6-777P-201ENST00000364265 104 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 RNA5SP126-201ENST00000365092 109 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 Y_RNA.548-201ENST00000384656 105 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 SNORA67.4-201ENST00000384688 142 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 MIR196B-201ENST00000384852 84 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
GABPAQ06546 AL356421.1-201ENST00000403255 413 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 YPEL5P1-201ENST00000419731 367 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms