Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC245389.1-201ENST00000605141 529 ntBASIC2.77□□□□□ -1.97
CBX1P83916 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.77□□□□□ -1.97
CBX1P83916 AC138932.5-201ENST00000617759 563 ntBASIC2.77□□□□□ -1.97
CBX1P83916 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.77□□□□□ -1.97
CBX1P83916 AC012442.3-202ENST00000636742 206 ntBASIC2.77□□□□□ -1.97
CBX1P83916 Z82195.2-201ENST00000612348 18351 ntBASIC2.77□□□□□ -1.97
CBX1P83916 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CBX1P83916 Z82209.1-201ENST00000422141 2135 ntBASIC2.77□□□□□ -1.97
CBX1P83916 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.76□□□□□ -1.97
CBX1P83916 AC093536.2-201ENST00000565257 1406 ntBASIC2.76□□□□□ -1.97
CBX1P83916 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CBX1P83916 AC011477.1-204ENST00000623416 1325 ntBASIC2.76□□□□□ -1.97
CBX1P83916 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CBX1P83916 AL356421.1-201ENST00000403255 413 ntBASIC2.76□□□□□ -1.97
CBX1P83916 VN1R51P-201ENST00000411675 945 ntBASIC2.76□□□□□ -1.97
CBX1P83916 YME1L1P1-201ENST00000429435 297 ntBASIC2.76□□□□□ -1.97
CBX1P83916 ATP5F1P1-201ENST00000433775 569 ntBASIC2.76□□□□□ -1.97
CBX1P83916 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.76□□□□□ -1.97
CBX1P83916 MTND1P9-201ENST00000453775 944 ntBASIC2.76□□□□□ -1.97
CBX1P83916 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.76□□□□□ -1.97
CBX1P83916 MEMO1P3-201ENST00000459811 302 ntBASIC2.76□□□□□ -1.97
CBX1P83916 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.76□□□□□ -1.97
CBX1P83916 RPL7P49-201ENST00000471402 708 ntBASIC2.76□□□□□ -1.97
CBX1P83916 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.76□□□□□ -1.97
CBX1P83916 GTF2IP9-201ENST00000502460 301 ntBASIC2.76□□□□□ -1.97
CBX1P83916 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.76□□□□□ -1.97
CBX1P83916 AC110794.1-201ENST00000505816 425 ntBASIC2.76□□□□□ -1.97
CBX1P83916 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.76□□□□□ -1.97
CBX1P83916 AP003497.1-201ENST00000528472 562 ntBASIC2.76□□□□□ -1.97
CBX1P83916 AP002748.2-201ENST00000528671 348 ntBASIC2.76□□□□□ -1.97
CBX1P83916 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.76□□□□□ -1.97
CBX1P83916 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.76□□□□□ -1.97
CBX1P83916 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.76□□□□□ -1.97
CBX1P83916 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CBX1P83916 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.76□□□□□ -1.97
CBX1P83916 AC090888.1-201ENST00000561335 1141 ntBASIC2.76□□□□□ -1.97
CBX1P83916 AC009163.5-201ENST00000575421 637 ntBASIC2.76□□□□□ -1.97
CBX1P83916 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.76□□□□□ -1.97
CBX1P83916 AC010620.2-201ENST00000600135 313 ntBASIC2.76□□□□□ -1.97
CBX1P83916 CKS1BP3-201ENST00000600888 237 ntBASIC2.76□□□□□ -1.97
CBX1P83916 ELOCP35-201ENST00000604289 336 ntBASIC2.76□□□□□ -1.97
CBX1P83916 AC004852.3-201ENST00000614131 326 ntBASIC2.76□□□□□ -1.97
CBX1P83916 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.76□□□□□ -1.97
CBX1P83916 AC039056.2-201ENST00000622261 511 ntBASIC2.76□□□□□ -1.97
CBX1P83916 AC002064.3-201ENST00000623448 346 ntBASIC2.76□□□□□ -1.97
CBX1P83916 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.76□□□□□ -1.97
CBX1P83916 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.76□□□□□ -1.97
CBX1P83916 AC116618.1-201ENST00000634617 774 ntBASIC2.76□□□□□ -1.97
CBX1P83916 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.76□□□□□ -1.97
CBX1P83916 AC138915.1-201ENST00000565427 1685 ntBASIC2.76□□□□□ -1.97
CBX1P83916 DDX43P2-201ENST00000604753 1354 ntBASIC2.75□□□□□ -1.97
CBX1P83916 SNORA7.4-201ENST00000384249 137 ntBASIC2.75□□□□□ -1.97
CBX1P83916 RNA5SP354-201ENST00000391247 136 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AL365496.1-201ENST00000426885 215 ntBASIC2.75□□□□□ -1.97
CBX1P83916 ZYG11AP1-201ENST00000430329 837 ntBASIC2.75□□□□□ -1.97
CBX1P83916 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.75□□□□□ -1.97
CBX1P83916 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.75□□□□□ -1.97
CBX1P83916 BMI1P1-201ENST00000445879 941 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AL671855.1-201ENST00000446875 1203 ntBASIC2.75□□□□□ -1.97
CBX1P83916 MTATP6P14-201ENST00000455189 673 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AC091153.1-201ENST00000466297 402 ntBASIC2.75□□□□□ -1.97
CBX1P83916 WBP1LP4-201ENST00000505043 344 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.75□□□□□ -1.97
CBX1P83916 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.75□□□□□ -1.97
CBX1P83916 AC024589.1-201ENST00000512207 263 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.75□□□□□ -1.97
CBX1P83916 RN7SKP272-201ENST00000516988 232 ntBASIC2.75□□□□□ -1.97
CBX1P83916 OR4R1P-201ENST00000529879 463 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AC007458.1-201ENST00000542812 373 ntBASIC2.75□□□□□ -1.97
CBX1P83916 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.75□□□□□ -1.97
CBX1P83916 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.75□□□□□ -1.97
CBX1P83916 MTCYBP23-201ENST00000558717 1102 ntBASIC2.75□□□□□ -1.97
CBX1P83916 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.75□□□□□ -1.97
CBX1P83916 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.75□□□□□ -1.97
CBX1P83916 AP001269.3-201ENST00000588718 329 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AC006270.3-201ENST00000605967 1036 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AL121652.1-201ENST00000608851 448 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AC245297.2-201ENST00000610119 565 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AC107075.1-201ENST00000613695 314 ntBASIC2.75□□□□□ -1.97
CBX1P83916 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.75□□□□□ -1.97
CBX1P83916 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AC009268.2-201ENST00000621925 457 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.75□□□□□ -1.97
CBX1P83916 MIR622-201ENST00000638396 96 ntBASIC2.75□□□□□ -1.97
CBX1P83916 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.75□□□□□ -1.97
CBX1P83916 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CBX1P83916 AC092447.10-201ENST00000620607 1652 ntBASIC2.74□□□□□ -1.97
CBX1P83916 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CBX1P83916 RNU1-105P-201ENST00000363470 161 ntBASIC2.74□□□□□ -1.97
CBX1P83916 RNU1-51P-201ENST00000365345 176 ntBASIC2.74□□□□□ -1.97
CBX1P83916 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CBX1P83916 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CBX1P83916 RNU2-25P-201ENST00000411041 191 ntBASIC2.74□□□□□ -1.97
CBX1P83916 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.74□□□□□ -1.97
CBX1P83916 AC099548.1-201ENST00000421443 426 ntBASIC2.74□□□□□ -1.97
CBX1P83916 RPL7P37-201ENST00000425095 738 ntBASIC2.74□□□□□ -1.97
CBX1P83916 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.74□□□□□ -1.97
CBX1P83916 AC022018.1-201ENST00000430685 241 ntBASIC2.74□□□□□ -1.97
CBX1P83916 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms