Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA4P78363 AC090751.1-201ENST00000566966 267 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA4P78363 AC008739.2-201ENST00000597006 317 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA4P78363 RNU6-6P-201ENST00000606623 107 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 AC106730.3-201ENST00000624568 641 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 SDAD1P2-201ENST00000441308 2028 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA4P78363 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ABCA4P78363 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.51□□□□□ -2.17
ABCA4P78363 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.5□□□□□ -2.17
ABCA4P78363 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.5□□□□□ -2.17
ABCA4P78363 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA4P78363 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 USP9YP15-201ENST00000442391 422 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.5□□□□□ -2.17
ABCA4P78363 CDC42P1-201ENST00000456658 548 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC096992.1-201ENST00000459808 709 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 RNF138P1-201ENST00000502765 546 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 RNU6-1004P-201ENST00000516584 111 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.5□□□□□ -2.17
ABCA4P78363 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA4P78363 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA4P78363 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.5□□□□□ -2.17
ABCA4P78363 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.5□□□□□ -2.17
ABCA4P78363 NDUFA5P6-201ENST00000542110 379 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA4P78363 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA4P78363 WISP1-OT1-201ENST00000602893 642 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
ABCA4P78363 AL121594.5-201ENST00000631724 573 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.5□□□□□ -2.17
ABCA4P78363 ZNF876P-202ENST00000398732 1485 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
ABCA4P78363 ZNF355P-201ENST00000427301 3216 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ABCA4P78363 AC012321.1-201ENST00000561622 1588 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ABCA4P78363 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
ABCA4P78363 MIR627-201ENST00000384979 97 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC004965.1-201ENST00000413033 213 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.5□□□□□ -2.17
ABCA4P78363 RPS15AP7-201ENST00000439294 405 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC009296.1-201ENST00000443146 155 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.5□□□□□ -2.17
ABCA4P78363 RPS4XP11-201ENST00000446897 772 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC009474.2-201ENST00000451383 136 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 RNU6-717P-201ENST00000459076 104 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA4P78363 AC011604.1-201ENST00000545978 196 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA4P78363 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA4P78363 VN1R74P-201ENST00000613259 503 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC245884.12-201ENST00000615364 59 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 MIR6515-201ENST00000619843 57 ntBASIC1.5□□□□□ -2.17
ABCA4P78363 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.5□□□□□ -2.17
ABCA4P78363 Y_RNA.327-201ENST00000365201 102 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 MTCO3P12-201ENST00000416718 547 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 AL645568.3-201ENST00000433683 316 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.49□□□□□ -2.17
ABCA4P78363 AL139109.1-201ENST00000455491 297 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 AMD1P1-201ENST00000457220 922 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 AC087879.1-201ENST00000474343 374 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.49□□□□□ -2.17
ABCA4P78363 AC016065.2-201ENST00000514530 444 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 COX6CP5-201ENST00000527162 228 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
ABCA4P78363 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.49□□□□□ -2.17
ABCA4P78363 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.49□□□□□ -2.17
ABCA4P78363 KATNBL1P1-201ENST00000605192 748 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 MIR502-201ENST00000606349 86 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 AC068620.4-201ENST00000636730 1182 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
ABCA4P78363 ZNF734P-201ENST00000419494 1534 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 Y_RNA.205-201ENST00000364128 113 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 SET-203ENST00000372688 801 ntTSL 2 BASIC1.49□□□□□ -2.17
ABCA4P78363 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
ABCA4P78363 MIR493-201ENST00000385254 89 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 ANAPC10P1-201ENST00000395991 556 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.49□□□□□ -2.17
ABCA4P78363 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.49□□□□□ -2.17
ABCA4P78363 RABEPKP1-201ENST00000440529 1026 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.49□□□□□ -2.17
ABCA4P78363 SNORA31.8-201ENST00000516327 108 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 OR4V1P-201ENST00000525394 1140 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 NBEAP1-201ENST00000554452 979 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 AC124283.4-201ENST00000581815 456 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 AC117490.2-201ENST00000610042 594 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 AL512598.1-201ENST00000610158 273 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 RMST_2.1-201ENST00000617263 136 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 FO624990.1-201ENST00000636373 85 ntBASIC1.49□□□□□ -2.17
ABCA4P78363 AC233981.2-201ENST00000611524 1614 ntBASIC1.48□□□□□ -2.17
ABCA4P78363 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ABCA4P78363 Y_RNA.178-201ENST00000363832 102 ntBASIC1.48□□□□□ -2.17
ABCA4P78363 RPL7P30-201ENST00000420888 709 ntBASIC1.48□□□□□ -2.17
ABCA4P78363 RNF2P1-201ENST00000442955 1010 ntBASIC1.48□□□□□ -2.17
ABCA4P78363 HSFY3P-201ENST00000444242 1191 ntBASIC1.48□□□□□ -2.17
ABCA4P78363 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms