Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNA5SP126-201ENST00000365092 109 ntBASIC0.71□□□□□ -2.3
RPL39P62891 CCNB2P1-201ENST00000399411 1150 ntBASIC0.71□□□□□ -2.3
RPL39P62891 AL356131.1-201ENST00000405826 414 ntBASIC0.71□□□□□ -2.3
RPL39P62891 AL445687.1-201ENST00000439946 251 ntBASIC0.71□□□□□ -2.3
RPL39P62891 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.71□□□□□ -2.3
RPL39P62891 AC117503.1-201ENST00000472241 394 ntBASIC0.71□□□□□ -2.3
RPL39P62891 AC055731.1-201ENST00000474387 401 ntBASIC0.71□□□□□ -2.3
RPL39P62891 AC027575.1-201ENST00000481064 460 ntBASIC0.71□□□□□ -2.3
RPL39P62891 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.71□□□□□ -2.3
RPL39P62891 MRPS33P3-201ENST00000513456 322 ntBASIC0.71□□□□□ -2.3
RPL39P62891 AC117532.1-201ENST00000514638 323 ntBASIC0.71□□□□□ -2.3
RPL39P62891 RNU6-548P-201ENST00000517083 115 ntBASIC0.71□□□□□ -2.3
RPL39P62891 BTF3P12-201ENST00000519620 469 ntBASIC0.71□□□□□ -2.3
RPL39P62891 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC0.71□□□□□ -2.3
RPL39P62891 AL512598.1-201ENST00000610158 273 ntBASIC0.71□□□□□ -2.3
RPL39P62891 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC0.71□□□□□ -2.3
RPL39P62891 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
RPL39P62891 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
RPL39P62891 U8.10-201ENST00000384260 133 ntBASIC0.7□□□□□ -2.3
RPL39P62891 RPL23AP29-201ENST00000397284 453 ntBASIC0.7□□□□□ -2.3
RPL39P62891 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
RPL39P62891 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.7□□□□□ -2.3
RPL39P62891 BOLA3P4-201ENST00000418151 400 ntBASIC0.7□□□□□ -2.3
RPL39P62891 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.7□□□□□ -2.3
RPL39P62891 FABP5P3-201ENST00000437960 408 ntBASIC0.7□□□□□ -2.3
RPL39P62891 AC124916.1-201ENST00000444020 547 ntBASIC0.7□□□□□ -2.3
RPL39P62891 snoU13.15-201ENST00000459407 104 ntBASIC0.7□□□□□ -2.3
RPL39P62891 MTCO3P35-201ENST00000485582 781 ntBASIC0.7□□□□□ -2.3
RPL39P62891 RPL30P11-201ENST00000495304 339 ntBASIC0.7□□□□□ -2.3
RPL39P62891 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC0.7□□□□□ -2.3
RPL39P62891 AP000916.1-201ENST00000533869 835 ntBASIC0.7□□□□□ -2.3
RPL39P62891 AP000873.5-201ENST00000533906 236 ntBASIC0.7□□□□□ -2.3
RPL39P62891 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC0.7□□□□□ -2.3
RPL39P62891 MIR4287-201ENST00000579398 78 ntBASIC0.7□□□□□ -2.3
RPL39P62891 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.7□□□□□ -2.3
RPL39P62891 AC009220.3-201ENST00000604318 586 ntBASIC0.7□□□□□ -2.3
RPL39P62891 AL353770.2-201ENST00000620024 78 ntBASIC0.7□□□□□ -2.3
RPL39P62891 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.7□□□□□ -2.3
RPL39P62891 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
RPL39P62891 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
RPL39P62891 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.69□□□□□ -2.3
RPL39P62891 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
RPL39P62891 RNU1-17P-201ENST00000363022 152 ntBASIC0.69□□□□□ -2.3
RPL39P62891 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.69□□□□□ -2.3
RPL39P62891 RPL21P90-201ENST00000415692 466 ntBASIC0.69□□□□□ -2.3
RPL39P62891 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.69□□□□□ -2.3
RPL39P62891 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.69□□□□□ -2.3
RPL39P62891 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.69□□□□□ -2.3
RPL39P62891 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.69□□□□□ -2.3
RPL39P62891 AL022238.1-201ENST00000442557 355 ntBASIC0.69□□□□□ -2.3
RPL39P62891 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.69□□□□□ -2.3
RPL39P62891 AC009474.2-201ENST00000451383 136 ntBASIC0.69□□□□□ -2.3
RPL39P62891 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.69□□□□□ -2.3
RPL39P62891 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
RPL39P62891 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.69□□□□□ -2.3
RPL39P62891 RNA5SP445-201ENST00000515889 115 ntBASIC0.69□□□□□ -2.3
RPL39P62891 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.69□□□□□ -2.3
RPL39P62891 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.69□□□□□ -2.3
RPL39P62891 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.69□□□□□ -2.3
RPL39P62891 AP001542.2-201ENST00000593141 364 ntBASIC0.69□□□□□ -2.3
RPL39P62891 PRR13P7-201ENST00000605538 430 ntBASIC0.69□□□□□ -2.3
RPL39P62891 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC0.69□□□□□ -2.3
RPL39P62891 AL157834.3-201ENST00000615543 103 ntBASIC0.69□□□□□ -2.3
RPL39P62891 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.69□□□□□ -2.3
RPL39P62891 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
RPL39P62891 ZNF29P-201ENST00000225587 168 ntBASIC0.68□□□□□ -2.3
RPL39P62891 CBX3P1-201ENST00000325243 554 ntBASIC0.68□□□□□ -2.3
RPL39P62891 MIR126-201ENST00000362291 85 ntBASIC0.68□□□□□ -2.3
RPL39P62891 RNU6-661P-201ENST00000362409 107 ntBASIC0.68□□□□□ -2.3
RPL39P62891 RNU4-38P-201ENST00000364472 129 ntBASIC0.68□□□□□ -2.3
RPL39P62891 DEFB109C-201ENST00000382575 264 ntBASIC0.68□□□□□ -2.3
RPL39P62891 DEFB109B-201ENST00000382656 264 ntBASIC0.68□□□□□ -2.3
RPL39P62891 MIR153-1-201ENST00000384914 90 ntBASIC0.68□□□□□ -2.3
RPL39P62891 SNORA17.3-201ENST00000391159 129 ntBASIC0.68□□□□□ -2.3
RPL39P62891 RNU4-74P-201ENST00000411280 161 ntBASIC0.68□□□□□ -2.3
RPL39P62891 LUZP4P1-201ENST00000415420 344 ntBASIC0.68□□□□□ -2.3
RPL39P62891 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.68□□□□□ -2.3
RPL39P62891 VN1R31P-201ENST00000417498 730 ntBASIC0.68□□□□□ -2.3
RPL39P62891 MRPL35P3-201ENST00000421557 364 ntBASIC0.68□□□□□ -2.3
RPL39P62891 SFR1P2-201ENST00000421841 730 ntBASIC0.68□□□□□ -2.3
RPL39P62891 AC233981.1-201ENST00000423224 461 ntBASIC0.68□□□□□ -2.3
RPL39P62891 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.68□□□□□ -2.3
RPL39P62891 AL513124.1-201ENST00000450410 614 ntBASIC0.68□□□□□ -2.3
RPL39P62891 MTCO1P42-201ENST00000457379 726 ntBASIC0.68□□□□□ -2.3
RPL39P62891 RNU7-95P-201ENST00000459222 64 ntBASIC0.68□□□□□ -2.3
RPL39P62891 AP000926.3-201ENST00000497201 299 ntBASIC0.68□□□□□ -2.3
RPL39P62891 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.68□□□□□ -2.3
RPL39P62891 AC091917.2-201ENST00000505002 744 ntBASIC0.68□□□□□ -2.3
RPL39P62891 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC0.68□□□□□ -2.3
RPL39P62891 AP005639.2-201ENST00000527592 928 ntBASIC0.68□□□□□ -2.3
RPL39P62891 EIF4EP5-201ENST00000528228 640 ntBASIC0.68□□□□□ -2.3
RPL39P62891 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.68□□□□□ -2.3
RPL39P62891 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.68□□□□□ -2.3
RPL39P62891 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.68□□□□□ -2.3
RPL39P62891 AC012254.4-201ENST00000588843 273 ntBASIC0.68□□□□□ -2.3
RPL39P62891 AC005034.5-201ENST00000604219 466 ntBASIC0.68□□□□□ -2.3
RPL39P62891 AC021646.1-201ENST00000605469 484 ntBASIC0.68□□□□□ -2.3
RPL39P62891 AC013412.1-201ENST00000610687 192 ntBASIC0.68□□□□□ -2.3
RPL39P62891 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
RPL39P62891 OR4G11P-202ENST00000642116 1414 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms