Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC008568.2-201ENST00000623862 2313 ntBASIC1.54□□□□□ -2.16
LSM3P62310 AP006437.1-201ENST00000641440 3685 ntBASIC1.54□□□□□ -2.16
LSM3P62310 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.54□□□□□ -2.16
LSM3P62310 RNU4-23P-201ENST00000362839 140 ntBASIC1.54□□□□□ -2.16
LSM3P62310 RPS4XP8-201ENST00000402039 771 ntBASIC1.54□□□□□ -2.16
LSM3P62310 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
LSM3P62310 AC016769.2-201ENST00000414815 475 ntBASIC1.54□□□□□ -2.16
LSM3P62310 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.54□□□□□ -2.16
LSM3P62310 AC009237.2-201ENST00000421358 284 ntBASIC1.54□□□□□ -2.16
LSM3P62310 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.54□□□□□ -2.16
LSM3P62310 DDX3P2-201ENST00000446138 111 ntBASIC1.54□□□□□ -2.16
LSM3P62310 RPL7P12-201ENST00000446719 750 ntBASIC1.54□□□□□ -2.16
LSM3P62310 DNAJC19P8-201ENST00000452887 259 ntBASIC1.54□□□□□ -2.16
LSM3P62310 RNU7-23P-201ENST00000459465 62 ntBASIC1.54□□□□□ -2.16
LSM3P62310 RPS3AP14-201ENST00000483907 780 ntBASIC1.54□□□□□ -2.16
LSM3P62310 AC068781.1-201ENST00000488231 618 ntBASIC1.54□□□□□ -2.16
LSM3P62310 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.54□□□□□ -2.16
LSM3P62310 MTCO1P31-201ENST00000506355 492 ntBASIC1.54□□□□□ -2.16
LSM3P62310 SNORA31.18-201ENST00000517043 134 ntBASIC1.54□□□□□ -2.16
LSM3P62310 AP003122.3-201ENST00000526316 255 ntBASIC1.54□□□□□ -2.16
LSM3P62310 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.54□□□□□ -2.16
LSM3P62310 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.54□□□□□ -2.16
LSM3P62310 EEF1B2P4-201ENST00000551398 348 ntBASIC1.54□□□□□ -2.16
LSM3P62310 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.54□□□□□ -2.16
LSM3P62310 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.54□□□□□ -2.16
LSM3P62310 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.54□□□□□ -2.16
LSM3P62310 AL096840.1-201ENST00000603287 93 ntBASIC1.54□□□□□ -2.16
LSM3P62310 AL450336.1-201ENST00000605180 586 ntBASIC1.54□□□□□ -2.16
LSM3P62310 AC068944.2-201ENST00000610373 403 ntBASIC1.54□□□□□ -2.16
LSM3P62310 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
LSM3P62310 AC068057.2-201ENST00000624047 895 ntBASIC1.54□□□□□ -2.16
LSM3P62310 AC017104.5-201ENST00000637647 639 ntBASIC1.54□□□□□ -2.16
LSM3P62310 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.54□□□□□ -2.16
LSM3P62310 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.54□□□□□ -2.16
LSM3P62310 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
LSM3P62310 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
LSM3P62310 RN7SKP226-201ENST00000364912 300 ntBASIC1.53□□□□□ -2.16
LSM3P62310 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
LSM3P62310 MIR649-201ENST00000384843 97 ntBASIC1.53□□□□□ -2.16
LSM3P62310 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
LSM3P62310 Z86062.1-201ENST00000406773 777 ntBASIC1.53□□□□□ -2.16
LSM3P62310 RNU4-53P-201ENST00000410828 140 ntBASIC1.53□□□□□ -2.16
LSM3P62310 MTND5P31-201ENST00000419366 1374 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AL445685.2-201ENST00000422551 342 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.53□□□□□ -2.16
LSM3P62310 AC007560.1-201ENST00000426912 237 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AL645568.3-201ENST00000433683 316 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.53□□□□□ -2.16
LSM3P62310 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
LSM3P62310 OR10R1P-201ENST00000441524 1141 ntBASIC1.53□□□□□ -2.16
LSM3P62310 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.53□□□□□ -2.16
LSM3P62310 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
LSM3P62310 MTND4P27-201ENST00000450813 1354 ntBASIC1.53□□□□□ -2.16
LSM3P62310 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.53□□□□□ -2.16
LSM3P62310 AL049714.1-201ENST00000466686 347 ntBASIC1.53□□□□□ -2.16
LSM3P62310 VPS26AP1-201ENST00000483197 979 ntBASIC1.53□□□□□ -2.16
LSM3P62310 RPL30P5-201ENST00000494923 336 ntBASIC1.53□□□□□ -2.16
LSM3P62310 RPS29P11-201ENST00000496507 171 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.53□□□□□ -2.16
LSM3P62310 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.53□□□□□ -2.16
LSM3P62310 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.53□□□□□ -2.16
LSM3P62310 AC109464.2-201ENST00000510242 943 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.53□□□□□ -2.16
LSM3P62310 AP005902.1-201ENST00000521358 186 ntBASIC1.53□□□□□ -2.16
LSM3P62310 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.53□□□□□ -2.16
LSM3P62310 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.53□□□□□ -2.16
LSM3P62310 AC004217.3-201ENST00000551552 878 ntBASIC1.53□□□□□ -2.16
LSM3P62310 SETP7-201ENST00000552169 453 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC007375.1-201ENST00000554513 578 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.53□□□□□ -2.16
LSM3P62310 GTF2IP8-201ENST00000560687 584 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.53□□□□□ -2.16
LSM3P62310 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.53□□□□□ -2.16
LSM3P62310 CBX3P2-202ENST00000583365 535 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.53□□□□□ -2.16
LSM3P62310 AC026790.2-201ENST00000606282 430 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC021851.1-201ENST00000608537 1082 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC025594.3-201ENST00000613068 790 ntBASIC1.53□□□□□ -2.16
LSM3P62310 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC068722.2-201ENST00000618734 544 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.53□□□□□ -2.16
LSM3P62310 AC010872.1-201ENST00000624225 675 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC098679.5-201ENST00000624394 571 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC009487.4-201ENST00000624969 3585 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC091925.2-201ENST00000625059 256 ntBASIC1.53□□□□□ -2.16
LSM3P62310 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.53□□□□□ -2.16
LSM3P62310 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
LSM3P62310 AC046144.1-201ENST00000478559 1853 ntBASIC1.52□□□□□ -2.17
LSM3P62310 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LSM3P62310 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
LSM3P62310 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.52□□□□□ -2.17
LSM3P62310 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.52□□□□□ -2.17
LSM3P62310 AL023807.1-201ENST00000407932 359 ntBASIC1.52□□□□□ -2.17
LSM3P62310 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.52□□□□□ -2.17
LSM3P62310 FCF1P2-201ENST00000415284 583 ntBASIC1.52□□□□□ -2.17
LSM3P62310 RPL23AP39-201ENST00000415533 405 ntBASIC1.52□□□□□ -2.17
LSM3P62310 CYCSP48-201ENST00000417124 323 ntBASIC1.52□□□□□ -2.17
LSM3P62310 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.52□□□□□ -2.17
LSM3P62310 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.52□□□□□ -2.17
LSM3P62310 RPL27AP8-201ENST00000424277 446 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms