Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC067852.3-201ENST00000589177 561 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.97□□□□□ -1.77
CLRN1P58418 DPPA3P3-201ENST00000603842 430 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 AC104763.2-201ENST00000604179 382 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 Z98200.1-201ENST00000607298 470 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 PART1_1.1-201ENST00000611761 217 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 AL365204.3-201ENST00000612448 685 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 uc_338.18-201ENST00000615451 175 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 AL138721.1-201ENST00000616756 179 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 AL023881.1-201ENST00000621088 301 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 AC007546.2-201ENST00000623996 360 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.97□□□□□ -1.77
CLRN1P58418 MIR4275-201ENST00000636486 87 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.97□□□□□ -1.77
CLRN1P58418 LINC01109-201ENST00000603837 3081 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.97□□□□□ -1.77
CLRN1P58418 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLRN1P58418 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLRN1P58418 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.97□□□□□ -1.77
CLRN1P58418 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.96□□□□□ -1.78
CLRN1P58418 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.96□□□□□ -1.78
CLRN1P58418 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN1P58418 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN1P58418 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CLRN1P58418 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.96□□□□□ -1.78
CLRN1P58418 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CLRN1P58418 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN1P58418 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.96□□□□□ -1.78
CLRN1P58418 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CLRN1P58418 Y_RNA.339-201ENST00000365325 102 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 RNA5SP22-201ENST00000365393 109 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 RNU6-1074P-201ENST00000383995 104 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 SNORA70F-201ENST00000384142 135 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 RNU6-14P-201ENST00000384630 106 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 RNA5SP219-201ENST00000390940 113 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 RNU4-14P-201ENST00000410858 122 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 AL353729.1-201ENST00000425044 720 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.96□□□□□ -1.78
CLRN1P58418 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.96□□□□□ -1.78
CLRN1P58418 AC005019.1-201ENST00000436455 431 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN1P58418 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.96□□□□□ -1.78
CLRN1P58418 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.96□□□□□ -1.78
CLRN1P58418 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.96□□□□□ -1.78
CLRN1P58418 HMGN1P10-201ENST00000474557 553 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 RPL7P43-201ENST00000478876 753 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 RN7SL817P-201ENST00000480777 288 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 AC106872.2-201ENST00000494303 480 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 RPS27AP13-201ENST00000498403 237 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.96□□□□□ -1.78
CLRN1P58418 AC021146.3-201ENST00000511911 260 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 RNU6-189P-201ENST00000516120 101 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 RN7SKP60-201ENST00000516985 239 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 SNORA25.17-201ENST00000517184 124 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN1P58418 AC106782.4-201ENST00000568264 210 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.96□□□□□ -1.78
CLRN1P58418 AC174048.1-201ENST00000603389 144 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 AC020910.2-201ENST00000603635 610 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 AC104662.1-201ENST00000604448 511 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 APOOP1-201ENST00000604695 592 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 AL160290.3-201ENST00000604869 165 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 AC245389.1-201ENST00000605141 529 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 RNA5SP108-201ENST00000605921 117 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 AC009570.1-201ENST00000609599 745 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.96□□□□□ -1.78
CLRN1P58418 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 AC019278.1-201ENST00000623516 479 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 MTND4LP32-201ENST00000636111 270 ntBASIC3.96□□□□□ -1.78
CLRN1P58418 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN1P58418 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CLRN1P58418 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN1P58418 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN1P58418 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.96□□□□□ -1.78
CLRN1P58418 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.95□□□□□ -1.78
CLRN1P58418 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.95□□□□□ -1.78
CLRN1P58418 AC022893.2-201ENST00000564832 3296 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN1P58418 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.95□□□□□ -1.78
CLRN1P58418 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN1P58418 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.95□□□□□ -1.78
CLRN1P58418 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CLRN1P58418 RNA5SP307-201ENST00000362863 116 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 Y_RNA.162-201ENST00000363683 102 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 RNU6-190P-201ENST00000384154 102 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 MIR659-201ENST00000384963 97 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 Y_RNA.579-201ENST00000390939 94 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 SNORD70.1-201ENST00000391007 85 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 EIF4E2P1-201ENST00000393781 255 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 CISD1P1-201ENST00000393907 327 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 RPS16P5-201ENST00000406501 404 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 MIR548K-201ENST00000408406 116 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 MIR548F5-201ENST00000408421 86 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 VN1R36P-201ENST00000414936 291 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 BX682237.1-201ENST00000415016 335 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AC119751.6-201ENST00000416712 186 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.95□□□□□ -1.78
CLRN1P58418 PDSS1P1-201ENST00000422953 1114 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms