Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 MIR491-201ENST00000384877 84 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
FOXA3P55318 RNA5SP270-201ENST00000411361 118 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.5□□□□□ -2.17
FOXA3P55318 AC099548.1-201ENST00000421443 426 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.5□□□□□ -2.17
FOXA3P55318 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.5□□□□□ -2.17
FOXA3P55318 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.5□□□□□ -2.17
FOXA3P55318 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.5□□□□□ -2.17
FOXA3P55318 MTCYBP45-201ENST00000435243 565 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 TAAR7P-201ENST00000436141 242 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 Z80107.1-201ENST00000436830 412 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.5□□□□□ -2.17
FOXA3P55318 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
FOXA3P55318 CYCSP32-201ENST00000440548 321 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 MRPS17P9-201ENST00000511924 393 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 AC118465.1-201ENST00000513820 1271 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 RNU4-29P-201ENST00000515943 174 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.5□□□□□ -2.17
FOXA3P55318 AC234778.2-201ENST00000566241 354 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.5□□□□□ -2.17
FOXA3P55318 AC105224.1-201ENST00000587055 421 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 AL109918.3-201ENST00000603072 338 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 SNRPGP19-201ENST00000603826 189 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 AC021749.1-201ENST00000604322 607 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 AC012493.3-201ENST00000604494 112 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 AC025588.2-201ENST00000604851 466 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 AC083865.1-201ENST00000636634 831 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
FOXA3P55318 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
FOXA3P55318 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.5□□□□□ -2.17
FOXA3P55318 SEC63P2-201ENST00000503863 1939 ntBASIC1.5□□□□□ -2.17
FOXA3P55318 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
FOXA3P55318 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
FOXA3P55318 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
FOXA3P55318 SNORD51-201ENST00000384320 80 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 RNU2-17P-201ENST00000410290 190 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 FCF1P2-201ENST00000415284 583 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 Z85995.1-201ENST00000415547 335 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 NUP35P1-201ENST00000422734 947 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 PNRC2P1-201ENST00000423940 420 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.49□□□□□ -2.17
FOXA3P55318 AL512844.2-201ENST00000433990 593 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 RPL35AP22-201ENST00000436855 335 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 RAC1P7-201ENST00000445367 377 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 AC009237.8-201ENST00000445492 379 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.49□□□□□ -2.17
FOXA3P55318 AL592447.1-201ENST00000447592 540 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.49□□□□□ -2.17
FOXA3P55318 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.49□□□□□ -2.17
FOXA3P55318 SETP6-201ENST00000479329 568 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 AC006390.1-201ENST00000508068 283 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 RNA5SP356-201ENST00000515972 94 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 RNU5A-7P-201ENST00000515979 116 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 SCARNA17.1-201ENST00000516211 143 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 SCARNA17.2-201ENST00000516334 143 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 SNORA26.10-201ENST00000516427 141 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 RNU2-19P-201ENST00000517288 84 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.49□□□□□ -2.17
FOXA3P55318 HMGN1P28-201ENST00000521340 364 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
FOXA3P55318 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.49□□□□□ -2.17
FOXA3P55318 AC004217.3-201ENST00000551552 878 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.49□□□□□ -2.17
FOXA3P55318 MIR4287-201ENST00000579398 78 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 LARP7P3-201ENST00000579888 337 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.49□□□□□ -2.17
FOXA3P55318 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
FOXA3P55318 SCARNA17.4-201ENST00000614296 143 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 AC098679.5-201ENST00000624394 571 ntBASIC1.49□□□□□ -2.17
FOXA3P55318 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
FOXA3P55318 AC011477.1-204ENST00000623416 1325 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.48□□□□□ -2.17
FOXA3P55318 FTLP6-201ENST00000355274 422 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 RNA5SP289-201ENST00000362332 137 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 AL035405.1-201ENST00000400795 710 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 AL355615.1-201ENST00000406187 641 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.48□□□□□ -2.17
FOXA3P55318 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXA3P55318 AL590383.1-201ENST00000428602 75 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 AC004383.1-201ENST00000438135 289 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXA3P55318 SDCBPP1-201ENST00000440192 890 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 DNAJC19P8-201ENST00000452887 259 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.48□□□□□ -2.17
FOXA3P55318 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.48□□□□□ -2.17
FOXA3P55318 AC026801.1-201ENST00000497178 464 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 AC105252.1-201ENST00000503089 286 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 HMGB3P17-201ENST00000504195 649 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 SUMO2P6-201ENST00000505273 288 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 SLC25A15P5-201ENST00000508033 253 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXA3P55318 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.48□□□□□ -2.17
FOXA3P55318 RNU5F-8P-201ENST00000515941 111 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 RNU6-1282P-201ENST00000516735 96 ntBASIC1.48□□□□□ -2.17
FOXA3P55318 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXA3P55318 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
FOXA3P55318 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.48□□□□□ -2.17
FOXA3P55318 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms