Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC025048.6-202ENST00000627667 438 ntBASIC3.28□□□□□ -1.88
CDH13P55290 AC010149.2-201ENST00000637608 315 ntBASIC3.28□□□□□ -1.88
CDH13P55290 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH13P55290 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
CDH13P55290 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH13P55290 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.89
CDH13P55290 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
CDH13P55290 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
CDH13P55290 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH13P55290 AC004972.1-201ENST00000623934 2209 ntBASIC3.27□□□□□ -1.89
CDH13P55290 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH13P55290 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CDH13P55290 RPL7P26-201ENST00000333817 754 ntBASIC3.27□□□□□ -1.89
CDH13P55290 RNU4-35P-201ENST00000362588 141 ntBASIC3.27□□□□□ -1.89
CDH13P55290 Y_RNA.126-201ENST00000363382 111 ntBASIC3.27□□□□□ -1.89
CDH13P55290 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH13P55290 SNORA1.3-201ENST00000384676 136 ntBASIC3.27□□□□□ -1.89
CDH13P55290 RNU6-1197P-201ENST00000391183 107 ntBASIC3.27□□□□□ -1.89
CDH13P55290 Y_RNA.598-201ENST00000410480 95 ntBASIC3.27□□□□□ -1.89
CDH13P55290 RPL21P24-201ENST00000413752 448 ntBASIC3.27□□□□□ -1.89
CDH13P55290 AC245291.1-201ENST00000419501 328 ntBASIC3.27□□□□□ -1.89
CDH13P55290 TMEM167AP1-201ENST00000423409 219 ntBASIC3.27□□□□□ -1.89
CDH13P55290 AL356583.2-201ENST00000426536 280 ntBASIC3.27□□□□□ -1.89
CDH13P55290 MTATP6P26-201ENST00000445926 662 ntBASIC3.27□□□□□ -1.89
CDH13P55290 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CDH13P55290 RNA5SP269-201ENST00000459032 137 ntBASIC3.27□□□□□ -1.89
CDH13P55290 RPL7P15-201ENST00000461190 712 ntBASIC3.27□□□□□ -1.89
CDH13P55290 AC008481.1-201ENST00000463278 396 ntBASIC3.27□□□□□ -1.89
CDH13P55290 AC092754.2-201ENST00000463506 460 ntBASIC3.27□□□□□ -1.89
CDH13P55290 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH13P55290 RPL30P5-201ENST00000494923 336 ntBASIC3.27□□□□□ -1.89
CDH13P55290 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDH13P55290 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH13P55290 IGKV2-26-201ENST00000518305 343 ntBASIC3.27□□□□□ -1.89
CDH13P55290 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH13P55290 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
CDH13P55290 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH13P55290 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH13P55290 AC005476.1-201ENST00000554427 397 ntBASIC3.27□□□□□ -1.89
CDH13P55290 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH13P55290 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH13P55290 AF038458.1-201ENST00000588406 262 ntBASIC3.27□□□□□ -1.89
CDH13P55290 AC112191.3-201ENST00000604371 277 ntBASIC3.27□□□□□ -1.89
CDH13P55290 AC010133.1-201ENST00000615809 842 ntBASIC3.27□□□□□ -1.89
CDH13P55290 AC002076.2-201ENST00000617362 122 ntBASIC3.27□□□□□ -1.89
CDH13P55290 MIR6076-201ENST00000617521 113 ntBASIC3.27□□□□□ -1.89
CDH13P55290 AC009093.8-201ENST00000641769 292 ntBASIC3.27□□□□□ -1.89
CDH13P55290 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH13P55290 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH13P55290 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CDH13P55290 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH13P55290 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CDH13P55290 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.26□□□□□ -1.89
CDH13P55290 RNA5SP383-201ENST00000362934 120 ntBASIC3.26□□□□□ -1.89
CDH13P55290 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH13P55290 FAT1P1-201ENST00000406588 507 ntBASIC3.26□□□□□ -1.89
CDH13P55290 RNU2-62P-201ENST00000410868 191 ntBASIC3.26□□□□□ -1.89
CDH13P55290 HMGB3P23-201ENST00000414981 585 ntBASIC3.26□□□□□ -1.89
CDH13P55290 USP9YP13-201ENST00000417797 480 ntBASIC3.26□□□□□ -1.89
CDH13P55290 AC073063.1-201ENST00000434352 607 ntBASIC3.26□□□□□ -1.89
CDH13P55290 TAAR7P-201ENST00000436141 242 ntBASIC3.26□□□□□ -1.89
CDH13P55290 HMGN2P20-201ENST00000437531 273 ntBASIC3.26□□□□□ -1.89
CDH13P55290 AC009961.3-201ENST00000449832 765 ntBASIC3.26□□□□□ -1.89
CDH13P55290 MTND2P24-201ENST00000453434 806 ntBASIC3.26□□□□□ -1.89
CDH13P55290 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.26□□□□□ -1.89
CDH13P55290 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH13P55290 RNA5SP310-201ENST00000459084 116 ntBASIC3.26□□□□□ -1.89
CDH13P55290 AC106707.2-201ENST00000484182 374 ntBASIC3.26□□□□□ -1.89
CDH13P55290 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH13P55290 SNORA64.4-201ENST00000516632 81 ntBASIC3.26□□□□□ -1.89
CDH13P55290 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH13P55290 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CDH13P55290 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CDH13P55290 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH13P55290 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH13P55290 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CDH13P55290 ACTR3BP3-201ENST00000565577 979 ntBASIC3.26□□□□□ -1.89
CDH13P55290 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH13P55290 AC110760.3-201ENST00000598794 467 ntBASIC3.26□□□□□ -1.89
CDH13P55290 AC006557.5-201ENST00000603126 811 ntBASIC3.26□□□□□ -1.89
CDH13P55290 AC068276.1-201ENST00000605793 379 ntBASIC3.26□□□□□ -1.89
CDH13P55290 RNU6-87P-201ENST00000607561 108 ntBASIC3.26□□□□□ -1.89
CDH13P55290 BX664608.1-201ENST00000610519 487 ntBASIC3.26□□□□□ -1.89
CDH13P55290 AC004696.1-201ENST00000614345 607 ntBASIC3.26□□□□□ -1.89
CDH13P55290 SDR42E1P2-201ENST00000614861 481 ntBASIC3.26□□□□□ -1.89
CDH13P55290 AC068831.7-201ENST00000616954 363 ntBASIC3.26□□□□□ -1.89
CDH13P55290 AC108479.2-201ENST00000617314 601 ntBASIC3.26□□□□□ -1.89
CDH13P55290 SNHG22-203ENST00000617833 660 ntBASIC3.26□□□□□ -1.89
CDH13P55290 PLCE1P1-201ENST00000622094 305 ntBASIC3.26□□□□□ -1.89
CDH13P55290 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.26□□□□□ -1.89
CDH13P55290 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH13P55290 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH13P55290 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH13P55290 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH13P55290 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CDH13P55290 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CDH13P55290 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CDH13P55290 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH13P55290 MTND2P4-201ENST00000445034 1004 ntBASIC3.25□□□□□ -1.89
CDH13P55290 AC009237.8-201ENST00000445492 379 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms