Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC010149.2-201ENST00000637608 315 ntBASIC3.22□□□□□ -1.89
CDH11P55287 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDH11P55287 AL133383.2-201ENST00000622958 2336 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AC091152.2-201ENST00000591628 2569 ntBASIC3.22□□□□□ -1.89
CDH11P55287 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH11P55287 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH11P55287 AC058791.1-201ENST00000608412 3198 ntBASIC3.22□□□□□ -1.89
CDH11P55287 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.21□□□□□ -1.89
CDH11P55287 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH11P55287 RNA5SP119-201ENST00000362715 117 ntBASIC3.21□□□□□ -1.9
CDH11P55287 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CDH11P55287 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDH11P55287 FCF1P10-201ENST00000407590 479 ntBASIC3.21□□□□□ -1.9
CDH11P55287 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.21□□□□□ -1.9
CDH11P55287 DUTP6-201ENST00000425573 462 ntBASIC3.21□□□□□ -1.9
CDH11P55287 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH11P55287 BX679664.1-201ENST00000434429 253 ntBASIC3.21□□□□□ -1.9
CDH11P55287 AC090774.1-201ENST00000435925 246 ntBASIC3.21□□□□□ -1.9
CDH11P55287 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH11P55287 AL357552.1-201ENST00000445254 415 ntBASIC3.21□□□□□ -1.9
CDH11P55287 MTND1P27-201ENST00000451117 902 ntBASIC3.21□□□□□ -1.9
CDH11P55287 RPS4XP2-201ENST00000458402 793 ntBASIC3.21□□□□□ -1.9
CDH11P55287 AC010285.1-201ENST00000470580 392 ntBASIC3.21□□□□□ -1.9
CDH11P55287 RPL31P13-201ENST00000484151 370 ntBASIC3.21□□□□□ -1.9
CDH11P55287 MTND1P3-201ENST00000484956 952 ntBASIC3.21□□□□□ -1.9
CDH11P55287 AC093278.1-201ENST00000494700 600 ntBASIC3.21□□□□□ -1.9
CDH11P55287 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH11P55287 NDUFB4P2-201ENST00000509515 391 ntBASIC3.21□□□□□ -1.9
CDH11P55287 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH11P55287 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH11P55287 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH11P55287 AL133271.1-201ENST00000538229 291 ntBASIC3.21□□□□□ -1.9
CDH11P55287 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH11P55287 AC026333.2-201ENST00000542164 106 ntBASIC3.21□□□□□ -1.9
CDH11P55287 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH11P55287 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH11P55287 AC012182.1-201ENST00000570133 895 ntBASIC3.21□□□□□ -1.9
CDH11P55287 MIR3146-201ENST00000580367 79 ntBASIC3.21□□□□□ -1.9
CDH11P55287 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH11P55287 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH11P55287 AC011468.4-201ENST00000603942 409 ntBASIC3.21□□□□□ -1.9
CDH11P55287 AC069200.1-201ENST00000609511 323 ntBASIC3.21□□□□□ -1.9
CDH11P55287 AL450472.3-201ENST00000615578 367 ntBASIC3.21□□□□□ -1.9
CDH11P55287 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH11P55287 AL159972.1-201ENST00000625150 448 ntBASIC3.21□□□□□ -1.9
CDH11P55287 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.21□□□□□ -1.9
CDH11P55287 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH11P55287 AC004925.1-201ENST00000624256 2706 ntBASIC3.21□□□□□ -1.9
CDH11P55287 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH11P55287 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH11P55287 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH11P55287 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
CDH11P55287 Y_RNA.41-201ENST00000362646 102 ntBASIC3.2□□□□□ -1.9
CDH11P55287 RNU5E-8P-201ENST00000363502 116 ntBASIC3.2□□□□□ -1.9
CDH11P55287 SNORA70.4-201ENST00000365509 134 ntBASIC3.2□□□□□ -1.9
CDH11P55287 RNU6-1074P-201ENST00000383995 104 ntBASIC3.2□□□□□ -1.9
CDH11P55287 RNU2-37P-201ENST00000410695 177 ntBASIC3.2□□□□□ -1.9
CDH11P55287 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH11P55287 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH11P55287 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH11P55287 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH11P55287 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH11P55287 TIMM9P1-201ENST00000436122 256 ntBASIC3.2□□□□□ -1.9
CDH11P55287 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH11P55287 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.2□□□□□ -1.9
CDH11P55287 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH11P55287 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH11P55287 snoU13.22-201ENST00000459428 104 ntBASIC3.2□□□□□ -1.9
CDH11P55287 KLF3P2-201ENST00000465138 268 ntBASIC3.2□□□□□ -1.9
CDH11P55287 AC135721.1-201ENST00000497954 479 ntBASIC3.2□□□□□ -1.9
CDH11P55287 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH11P55287 RPL37P25-201ENST00000507308 276 ntBASIC3.2□□□□□ -1.9
CDH11P55287 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH11P55287 AC005921.1-201ENST00000510589 286 ntBASIC3.2□□□□□ -1.9
CDH11P55287 AC022483.1-201ENST00000514020 567 ntBASIC3.2□□□□□ -1.9
CDH11P55287 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CDH11P55287 Y_RNA.672-201ENST00000516289 104 ntBASIC3.2□□□□□ -1.9
CDH11P55287 AC109635.4-202ENST00000531666 412 ntBASIC3.2□□□□□ -1.9
CDH11P55287 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.2□□□□□ -1.9
CDH11P55287 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH11P55287 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH11P55287 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH11P55287 AL133153.1-201ENST00000557756 303 ntBASIC3.2□□□□□ -1.9
CDH11P55287 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH11P55287 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH11P55287 AC068790.3-201ENST00000602988 553 ntBASIC3.2□□□□□ -1.9
CDH11P55287 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.2□□□□□ -1.9
CDH11P55287 AL357559.1-201ENST00000622228 274 ntBASIC3.2□□□□□ -1.9
CDH11P55287 AC243312.2-201ENST00000623340 601 ntBASIC3.2□□□□□ -1.9
CDH11P55287 AC110801.1-201ENST00000623590 212 ntBASIC3.2□□□□□ -1.9
CDH11P55287 PISRT1-201ENST00000626175 531 ntBASIC3.2□□□□□ -1.9
CDH11P55287 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH11P55287 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDH11P55287 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH11P55287 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH11P55287 FARSBP1-201ENST00000435808 1778 ntBASIC3.2□□□□□ -1.9
CDH11P55287 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDH11P55287 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH11P55287 AP001350.1-201ENST00000601906 1524 ntBASIC3.19□□□□□ -1.9
CDH11P55287 TAB3P1-202ENST00000452645 1634 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms