Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.79□□□□□ -2.12
CLTCL1P53675 AC130650.2-201ENST00000618736 2403 ntBASIC1.78□□□□□ -2.12
CLTCL1P53675 RPS20P15-201ENST00000412792 311 ntBASIC1.78□□□□□ -2.12
CLTCL1P53675 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CLTCL1P53675 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.78□□□□□ -2.12
CLTCL1P53675 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.78□□□□□ -2.12
CLTCL1P53675 AP002345.1-201ENST00000456493 928 ntBASIC1.78□□□□□ -2.12
CLTCL1P53675 AC093801.2-201ENST00000503966 1050 ntBASIC1.78□□□□□ -2.12
CLTCL1P53675 SNX5P1-201ENST00000505757 1041 ntBASIC1.78□□□□□ -2.12
CLTCL1P53675 AC016957.1-201ENST00000534895 309 ntBASIC1.78□□□□□ -2.12
CLTCL1P53675 AL137100.2-201ENST00000555786 315 ntBASIC1.78□□□□□ -2.12
CLTCL1P53675 UBE2L4-201ENST00000587688 464 ntBASIC1.78□□□□□ -2.12
CLTCL1P53675 DUXAP4-201ENST00000603046 613 ntBASIC1.78□□□□□ -2.12
CLTCL1P53675 AC008121.3-201ENST00000618726 433 ntBASIC1.78□□□□□ -2.12
CLTCL1P53675 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.78□□□□□ -2.12
CLTCL1P53675 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
CLTCL1P53675 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 RN7SKP51-201ENST00000410781 304 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 MED6P1-201ENST00000439659 713 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 SDCBPP1-201ENST00000440192 890 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 AC023790.1-201ENST00000482174 347 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 AC092902.1-201ENST00000486999 259 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 MTCYBP35-201ENST00000503630 1137 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 RNU6-1334P-201ENST00000516032 105 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.77□□□□□ -2.13
CLTCL1P53675 AP003117.1-201ENST00000602771 554 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 AC091895.1-201ENST00000624494 256 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CLTCL1P53675 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.77□□□□□ -2.13
CLTCL1P53675 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.77□□□□□ -2.13
CLTCL1P53675 AL356057.2-201ENST00000403318 432 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 AL033519.2-201ENST00000403958 392 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 RPS12P24-201ENST00000412619 387 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 SRIP3-201ENST00000413200 219 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 RPL35AP22-201ENST00000436855 335 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 RPL7P31-201ENST00000450192 724 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 HMGB1P26-201ENST00000452520 628 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.77□□□□□ -2.13
CLTCL1P53675 AP001804.3-201ENST00000525146 880 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.77□□□□□ -2.13
CLTCL1P53675 AC090425.2-201ENST00000608818 501 ntBASIC1.77□□□□□ -2.13
CLTCL1P53675 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CLTCL1P53675 ZNF90P2-204ENST00000419323 1075 ntBASIC1.76□□□□□ -2.13
CLTCL1P53675 VN1R108P-201ENST00000431580 830 ntBASIC1.76□□□□□ -2.13
CLTCL1P53675 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.76□□□□□ -2.13
CLTCL1P53675 HMGB3P17-201ENST00000504195 649 ntBASIC1.76□□□□□ -2.13
CLTCL1P53675 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.76□□□□□ -2.13
CLTCL1P53675 AC125611.2-201ENST00000551907 647 ntBASIC1.76□□□□□ -2.13
CLTCL1P53675 HSPE1P3-201ENST00000559254 309 ntBASIC1.76□□□□□ -2.13
CLTCL1P53675 AC006249.1-201ENST00000621223 471 ntBASIC1.76□□□□□ -2.13
CLTCL1P53675 CDC27P3-201ENST00000635418 1910 ntBASIC1.76□□□□□ -2.13
CLTCL1P53675 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.75□□□□□ -2.13
CLTCL1P53675 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CLTCL1P53675 RNU6-1180P-201ENST00000364935 107 ntBASIC1.75□□□□□ -2.13
CLTCL1P53675 MIR598-201ENST00000384868 97 ntBASIC1.75□□□□□ -2.13
CLTCL1P53675 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.75□□□□□ -2.13
CLTCL1P53675 RPL31P63-201ENST00000422565 375 ntBASIC1.75□□□□□ -2.13
CLTCL1P53675 FABP5P3-201ENST00000437960 408 ntBASIC1.75□□□□□ -2.13
CLTCL1P53675 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.75□□□□□ -2.13
CLTCL1P53675 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CLTCL1P53675 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.75□□□□□ -2.13
CLTCL1P53675 ARL2BPP4-201ENST00000506854 471 ntBASIC1.75□□□□□ -2.13
CLTCL1P53675 LTV1P1-201ENST00000510683 1237 ntBASIC1.75□□□□□ -2.13
CLTCL1P53675 CASP1P1-201ENST00000526345 212 ntBASIC1.75□□□□□ -2.13
CLTCL1P53675 MTATP6P3-201ENST00000581686 676 ntBASIC1.75□□□□□ -2.13
CLTCL1P53675 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.75□□□□□ -2.13
CLTCL1P53675 AC097504.2-201ENST00000608088 454 ntBASIC1.75□□□□□ -2.13
CLTCL1P53675 MIR7973-1-201ENST00000614683 76 ntBASIC1.75□□□□□ -2.13
CLTCL1P53675 MIR7974-201ENST00000615835 79 ntBASIC1.75□□□□□ -2.13
CLTCL1P53675 MIR6788-201ENST00000618842 66 ntBASIC1.75□□□□□ -2.13
CLTCL1P53675 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
CLTCL1P53675 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.75□□□□□ -2.13
CLTCL1P53675 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
CLTCL1P53675 AC002546.1-201ENST00000588041 2504 ntBASIC1.74□□□□□ -2.13
CLTCL1P53675 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CLTCL1P53675 SNORD114-27-201ENST00000363766 70 ntBASIC1.74□□□□□ -2.13
CLTCL1P53675 OR1L1-202ENST00000373686 1083 ntBASIC1.74□□□□□ -2.13
CLTCL1P53675 MTND4LP16-201ENST00000440828 295 ntBASIC1.74□□□□□ -2.13
CLTCL1P53675 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.74□□□□□ -2.13
CLTCL1P53675 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.74□□□□□ -2.13
CLTCL1P53675 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.74□□□□□ -2.13
CLTCL1P53675 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLTCL1P53675 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
CLTCL1P53675 AL355497.1-201ENST00000406262 551 ntBASIC1.73□□□□□ -2.13
CLTCL1P53675 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.73□□□□□ -2.13
CLTCL1P53675 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.73□□□□□ -2.13
CLTCL1P53675 RPS29P1-201ENST00000465274 159 ntBASIC1.73□□□□□ -2.13
CLTCL1P53675 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.73□□□□□ -2.13
CLTCL1P53675 AC008837.2-201ENST00000513076 418 ntBASIC1.73□□□□□ -2.13
CLTCL1P53675 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.73□□□□□ -2.13
CLTCL1P53675 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.73□□□□□ -2.13
CLTCL1P53675 AC109446.2-201ENST00000567872 497 ntBASIC1.73□□□□□ -2.13
CLTCL1P53675 AC106028.5-201ENST00000610332 395 ntBASIC1.73□□□□□ -2.13
CLTCL1P53675 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.73□□□□□ -2.13
CLTCL1P53675 MKKS-204ENST00000639674 192 ntBASIC1.73□□□□□ -2.13
CLTCL1P53675 HMGB1P5-201ENST00000255320 642 ntBASIC1.73□□□□□ -2.13
CLTCL1P53675 RNU6-997P-201ENST00000384725 107 ntBASIC1.73□□□□□ -2.13
CLTCL1P53675 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CLTCL1P53675 RPS3AP22-201ENST00000488297 769 ntBASIC1.73□□□□□ -2.13
CLTCL1P53675 NPM1P52-201ENST00000518264 846 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms