Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 NDUFB9P3-201ENST00000521269 501 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 DUXAP5-201ENST00000529668 529 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.39□□□□□ -1.87
LIMK1P53667 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.39□□□□□ -1.87
LIMK1P53667 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.39□□□□□ -1.87
LIMK1P53667 AC060771.1-201ENST00000582031 164 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 AC090616.2-202ENST00000584248 222 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 AC008751.2-201ENST00000597885 980 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 U4.6-201ENST00000621618 127 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMK1P53667 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMK1P53667 AC099063.3-201ENST00000642066 185 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIMK1P53667 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.39□□□□□ -1.87
LIMK1P53667 AL365361.1-201ENST00000566942 3481 ntBASIC3.39□□□□□ -1.87
LIMK1P53667 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LIMK1P53667 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.39□□□□□ -1.87
LIMK1P53667 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LIMK1P53667 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LIMK1P53667 AC091564.4-201ENST00000533934 2194 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
LIMK1P53667 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LIMK1P53667 RNU6-637P-201ENST00000384050 107 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 RPS3AP24-201ENST00000407896 734 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 RPS7P13-201ENST00000413955 498 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.38□□□□□ -1.87
LIMK1P53667 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.38□□□□□ -1.87
LIMK1P53667 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.38□□□□□ -1.87
LIMK1P53667 NDUFB1P1-201ENST00000435191 180 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 FAM103A2P-201ENST00000444122 354 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LIMK1P53667 AL133217.1-201ENST00000450980 425 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 MTND1P9-201ENST00000453775 944 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 AC010468.1-201ENST00000461022 817 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 AC109925.1-201ENST00000478069 331 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 AC092185.1-201ENST00000491371 97 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 AC006445.1-201ENST00000491925 405 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 MRPS33P3-201ENST00000513456 322 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 AP003497.1-201ENST00000528472 562 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.38□□□□□ -1.87
LIMK1P53667 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.38□□□□□ -1.87
LIMK1P53667 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.38□□□□□ -1.87
LIMK1P53667 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.38□□□□□ -1.87
LIMK1P53667 AC006557.5-201ENST00000603126 811 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.38□□□□□ -1.87
LIMK1P53667 AL033523.1-201ENST00000605153 153 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 AC007998.5-201ENST00000622938 237 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 AC120349.3-201ENST00000624377 529 ntBASIC3.38□□□□□ -1.87
LIMK1P53667 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LIMK1P53667 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LIMK1P53667 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LIMK1P53667 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LIMK1P53667 API5P2-201ENST00000397055 1498 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 AP003122.5-201ENST00000527668 3766 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.37□□□□□ -1.87
LIMK1P53667 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LIMK1P53667 RNU5F-7P-201ENST00000363696 115 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 RNA5SP42-201ENST00000364278 115 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 RNA5SP139-201ENST00000364340 117 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LIMK1P53667 Y_RNA.560-201ENST00000384689 102 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 AL136116.1-201ENST00000403591 381 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 AL357075.1-201ENST00000404107 726 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
LIMK1P53667 RNU6-55P-201ENST00000411092 107 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 RNA5SP31-201ENST00000411144 127 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 RNU6-954P-201ENST00000411355 107 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 AL359704.1-201ENST00000411586 781 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.37□□□□□ -1.87
LIMK1P53667 HMGB3P20-201ENST00000417997 600 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.37□□□□□ -1.87
LIMK1P53667 RPS6P15-201ENST00000431996 751 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 AC025750.2-201ENST00000442609 450 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 RPL32P28-201ENST00000443577 397 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.37□□□□□ -1.87
LIMK1P53667 AC097262.1-201ENST00000452559 548 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.37□□□□□ -1.87
LIMK1P53667 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.37□□□□□ -1.87
LIMK1P53667 AL031183.1-201ENST00000457667 207 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 BZW1P2-201ENST00000473537 826 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.37□□□□□ -1.87
LIMK1P53667 AC021205.2-201ENST00000480069 347 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 AC021678.1-201ENST00000505195 936 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.37□□□□□ -1.87
LIMK1P53667 AC116347.2-201ENST00000514912 523 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 RNU6-798P-201ENST00000516912 103 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 RNU6-232P-201ENST00000517144 64 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LIMK1P53667 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.37□□□□□ -1.87
LIMK1P53667 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.37□□□□□ -1.87
LIMK1P53667 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.37□□□□□ -1.87
LIMK1P53667 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.37□□□□□ -1.87
LIMK1P53667 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.37□□□□□ -1.87
LIMK1P53667 AP001004.1-201ENST00000582468 324 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 GLUD1P4-201ENST00000590914 418 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.37□□□□□ -1.87
LIMK1P53667 PRELID3BP8-201ENST00000604148 295 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 AC136601.2-201ENST00000604356 474 ntBASIC3.37□□□□□ -1.87
LIMK1P53667 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms