Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC027287.1-201ENST00000553115 1453 ntBASIC4.03□□□□□ -1.76
HMGA2P52926 AC018765.1-201ENST00000623357 3446 ntBASIC4.03□□□□□ -1.76
HMGA2P52926 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.03□□□□□ -1.76
HMGA2P52926 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
HMGA2P52926 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
HMGA2P52926 AC097714.1-201ENST00000511272 1647 ntBASIC4.03□□□□□ -1.77
HMGA2P52926 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
HMGA2P52926 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HMGA2P52926 AC087190.4-201ENST00000574616 8334 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGA2P52926 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HMGA2P52926 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HMGA2P52926 MAPK10-263ENST00000641052 4307 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HMGA2P52926 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGA2P52926 Y_RNA.428-201ENST00000384078 102 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 Y_RNA.478-201ENST00000384358 107 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 RNU6-1081P-201ENST00000384537 107 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 EIF4E2P1-201ENST00000393781 255 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 RNU2-33P-201ENST00000410344 192 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 RNU6-1050P-201ENST00000410388 107 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGA2P52926 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGA2P52926 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGA2P52926 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGA2P52926 AC002381.1-201ENST00000447049 280 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 HMGB3P30-201ENST00000457863 606 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 RPS26P39-201ENST00000469206 341 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 AC011005.3-201ENST00000491624 395 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 AC009901.1-201ENST00000506703 541 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGA2P52926 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGA2P52926 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGA2P52926 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGA2P52926 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGA2P52926 MIR4737-201ENST00000583979 81 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGA2P52926 RAC1P9-201ENST00000604990 392 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 AC004832.4-201ENST00000608952 331 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 OR6R2P-201ENST00000609216 300 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 SDR42E1P1-201ENST00000611327 477 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGA2P52926 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HMGA2P52926 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HMGA2P52926 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HMGA2P52926 SDAD1P1-202ENST00000524156 2051 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
HMGA2P52926 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGA2P52926 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGA2P52926 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGA2P52926 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HMGA2P52926 AL359893.1-201ENST00000447628 1580 ntBASIC4.02□□□□□ -1.77
HMGA2P52926 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGA2P52926 ZNF72P-201ENST00000425869 1908 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HMGA2P52926 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGA2P52926 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA2P52926 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA2P52926 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA2P52926 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HMGA2P52926 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGA2P52926 Y_RNA.105-201ENST00000363182 111 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 Y_RNA.152-201ENST00000363578 100 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 SNORA62.1-201ENST00000364287 154 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 RNU6-744P-201ENST00000365557 107 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 RNU6-81P-201ENST00000365608 104 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 Y_RNA.416-201ENST00000384014 113 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 RNU6-1316P-201ENST00000384242 108 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HMGA2P52926 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HMGA2P52926 RNA5SP397-201ENST00000391323 118 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 AL645733.1-201ENST00000402250 217 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 RPS4XP9-201ENST00000405151 780 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 RPL23AP27-201ENST00000415161 451 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGA2P52926 RPS12P10-201ENST00000427031 377 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGA2P52926 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGA2P52926 RPL31P44-201ENST00000447680 377 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 RPL35AP28-201ENST00000459730 331 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 AC053481.1-201ENST00000467217 306 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 RN7SL812P-201ENST00000493791 279 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.01□□□□□ -1.77
HMGA2P52926 AC116337.1-201ENST00000509680 687 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 SCARNA16.2-201ENST00000516520 172 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 RNU6-570P-201ENST00000517051 105 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGA2P52926 HMGN2P6-201ENST00000551091 273 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGA2P52926 LARP7P2-201ENST00000575306 125 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 AC105224.1-201ENST00000587055 421 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGA2P52926 AC079587.1-201ENST00000603846 277 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 Z98751.3-201ENST00000604447 521 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGA2P52926 uc_338.34-201ENST00000617467 174 ntBASIC4.01□□□□□ -1.77
HMGA2P52926 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HMGA2P52926 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms