Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNU6-579P-201ENST00000516879 102 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 RANP9-201ENST00000519957 271 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBEC1P41238 AP003033.1-201ENST00000527244 415 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBEC1P41238 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.3□□□□□ -1.88
APOBEC1P41238 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBEC1P41238 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBEC1P41238 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.3□□□□□ -1.88
APOBEC1P41238 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.3□□□□□ -1.88
APOBEC1P41238 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBEC1P41238 AC106785.1-201ENST00000565935 262 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.3□□□□□ -1.88
APOBEC1P41238 MIR3167-201ENST00000579623 85 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 MIR4293-201ENST00000584305 78 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBEC1P41238 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.3□□□□□ -1.88
APOBEC1P41238 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBEC1P41238 AC007687.1-201ENST00000602704 304 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 AL022154.1-201ENST00000604698 785 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 AP002826.1-201ENST00000608835 315 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 AC103710.2-201ENST00000609912 942 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBEC1P41238 U7.8-201ENST00000619968 63 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 AC073534.2-201ENST00000620377 381 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBEC1P41238 FRG1KP-201ENST00000623592 341 ntBASIC3.3□□□□□ -1.88
APOBEC1P41238 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBEC1P41238 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBEC1P41238 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBEC1P41238 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBEC1P41238 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBEC1P41238 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
APOBEC1P41238 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.3□□□□□ -1.88
APOBEC1P41238 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
APOBEC1P41238 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
APOBEC1P41238 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBEC1P41238 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBEC1P41238 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBEC1P41238 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
APOBEC1P41238 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOBEC1P41238 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBEC1P41238 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
APOBEC1P41238 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC1P41238 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC1P41238 U8.11-201ENST00000384699 133 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 U8.12-201ENST00000384701 133 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOBEC1P41238 GSTA9P-201ENST00000406231 611 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AL356967.1-201ENST00000406305 431 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 RNA5SP129-201ENST00000410276 118 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 CYCSP19-201ENST00000411715 316 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC1P41238 RPL30P2-201ENST00000414021 291 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 MTCO1P21-201ENST00000416634 589 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC1P41238 AC008850.1-201ENST00000427546 362 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 RPL7L1P10-201ENST00000427790 463 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 FCF1P1-201ENST00000432690 571 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AC007389.2-201ENST00000434630 306 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AL662791.1-201ENST00000441992 928 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC1P41238 MTND1P1-201ENST00000445453 368 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 RPS3AP46-201ENST00000448352 682 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.29□□□□□ -1.88
APOBEC1P41238 ANP32BP2-201ENST00000454525 545 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 U8.18-201ENST00000459285 133 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 RPS27AP1-201ENST00000475545 471 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC1P41238 RNU6-390P-201ENST00000516259 103 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 RNA5SP468-201ENST00000516782 93 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AC022616.3-201ENST00000523940 148 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 FAM60DP-201ENST00000524174 632 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC1P41238 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBEC1P41238 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC1P41238 AC093012.1-202ENST00000549403 582 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC1P41238 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC1P41238 AL845331.3-202ENST00000562856 261 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC1P41238 RPL23AP84-201ENST00000571193 464 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC1P41238 MIR3921-201ENST00000577308 85 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AC105224.1-201ENST00000587055 421 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC1P41238 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC1P41238 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC1P41238 AL606834.2-201ENST00000602954 668 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AC006077.1-201ENST00000604746 343 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC1P41238 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC1P41238 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.29□□□□□ -1.88
APOBEC1P41238 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
APOBEC1P41238 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC1P41238 AC099654.12-201ENST00000639868 649 ntBASIC3.29□□□□□ -1.88
APOBEC1P41238 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APOBEC1P41238 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms