Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
GDNFP39905 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.47□□□□□ -1.69
GDNFP39905 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GDNFP39905 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
GDNFP39905 SALL4P2-201ENST00000423288 2910 ntBASIC4.46□□□□□ -1.69
GDNFP39905 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
GDNFP39905 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GDNFP39905 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
GDNFP39905 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
GDNFP39905 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GDNFP39905 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GDNFP39905 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GDNFP39905 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
GDNFP39905 RNU6-280P-201ENST00000364145 104 ntBASIC4.46□□□□□ -1.7
GDNFP39905 RNA5SP242-201ENST00000364171 118 ntBASIC4.46□□□□□ -1.7
GDNFP39905 Y_RNA.274-201ENST00000364714 101 ntBASIC4.46□□□□□ -1.7
GDNFP39905 RN7SKP124-201ENST00000364730 341 ntBASIC4.46□□□□□ -1.7
GDNFP39905 RNU6-596P-201ENST00000365395 98 ntBASIC4.46□□□□□ -1.7
GDNFP39905 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
GDNFP39905 Y_RNA.471-201ENST00000384312 102 ntBASIC4.46□□□□□ -1.7
GDNFP39905 MIR323B-201ENST00000385269 82 ntBASIC4.46□□□□□ -1.7
GDNFP39905 SNORA17A-201ENST00000391185 133 ntBASIC4.46□□□□□ -1.7
GDNFP39905 MIR548H3-201ENST00000408771 118 ntBASIC4.46□□□□□ -1.7
GDNFP39905 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.46□□□□□ -1.7
GDNFP39905 SRSF1P1-201ENST00000424058 520 ntBASIC4.46□□□□□ -1.7
GDNFP39905 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.46□□□□□ -1.7
GDNFP39905 GSTM5P1-201ENST00000434751 660 ntBASIC4.46□□□□□ -1.7
GDNFP39905 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.46□□□□□ -1.7
GDNFP39905 RPL7AP61-201ENST00000443410 636 ntBASIC4.46□□□□□ -1.7
GDNFP39905 AC098869.1-201ENST00000481627 292 ntBASIC4.46□□□□□ -1.7
GDNFP39905 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.46□□□□□ -1.7
GDNFP39905 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.46□□□□□ -1.7
GDNFP39905 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.46□□□□□ -1.7
GDNFP39905 RNU6-677P-201ENST00000516914 101 ntBASIC4.46□□□□□ -1.7
GDNFP39905 RN7SKP60-201ENST00000516985 239 ntBASIC4.46□□□□□ -1.7
GDNFP39905 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.46□□□□□ -1.7
GDNFP39905 ERHP1-201ENST00000523006 310 ntBASIC4.46□□□□□ -1.7
GDNFP39905 AC107918.3-201ENST00000533272 382 ntBASIC4.46□□□□□ -1.7
GDNFP39905 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.46□□□□□ -1.7
GDNFP39905 SULT1C2P2-201ENST00000562517 294 ntBASIC4.46□□□□□ -1.7
GDNFP39905 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.46□□□□□ -1.7
GDNFP39905 AL390123.1-201ENST00000603216 237 ntBASIC4.46□□□□□ -1.7
GDNFP39905 AC073410.2-201ENST00000603240 332 ntBASIC4.46□□□□□ -1.7
GDNFP39905 AC174048.1-201ENST00000603389 144 ntBASIC4.46□□□□□ -1.7
GDNFP39905 AC007566.2-201ENST00000603642 413 ntBASIC4.46□□□□□ -1.7
GDNFP39905 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.46□□□□□ -1.7
GDNFP39905 AC000068.2-201ENST00000608816 460 ntBASIC4.46□□□□□ -1.7
GDNFP39905 SNORA17.5-201ENST00000630429 132 ntBASIC4.46□□□□□ -1.7
GDNFP39905 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
GDNFP39905 OR51H2P-202ENST00000641424 3046 ntBASIC4.46□□□□□ -1.7
GDNFP39905 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
GDNFP39905 NEAT1-202ENST00000501122 22743 ntBASIC4.46□□□□□ -1.7
GDNFP39905 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GDNFP39905 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.46□□□□□ -1.7
GDNFP39905 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GDNFP39905 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
GDNFP39905 SCARNA15-201ENST00000607520 4325 ntBASIC4.45□□□□□ -1.7
GDNFP39905 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
GDNFP39905 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GDNFP39905 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GDNFP39905 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.45□□□□□ -1.7
GDNFP39905 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GDNFP39905 MIR133B-201ENST00000362210 119 ntBASIC4.45□□□□□ -1.7
GDNFP39905 RN7SKP115-201ENST00000363177 317 ntBASIC4.45□□□□□ -1.7
GDNFP39905 RNU6-288P-201ENST00000363690 104 ntBASIC4.45□□□□□ -1.7
GDNFP39905 Y_RNA.297-201ENST00000364950 91 ntBASIC4.45□□□□□ -1.7
GDNFP39905 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
GDNFP39905 MIR625-201ENST00000385047 85 ntBASIC4.45□□□□□ -1.7
GDNFP39905 ENSAP1-201ENST00000392855 326 ntBASIC4.45□□□□□ -1.7
GDNFP39905 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
GDNFP39905 AL133388.1-201ENST00000404509 287 ntBASIC4.45□□□□□ -1.7
GDNFP39905 MIR548I2-201ENST00000408348 149 ntBASIC4.45□□□□□ -1.7
GDNFP39905 RNU2-33P-201ENST00000410344 192 ntBASIC4.45□□□□□ -1.7
GDNFP39905 RNU6-121P-201ENST00000410525 99 ntBASIC4.45□□□□□ -1.7
GDNFP39905 AP000275.1-201ENST00000411943 390 ntBASIC4.45□□□□□ -1.7
GDNFP39905 RPL31P2-201ENST00000413849 377 ntBASIC4.45□□□□□ -1.7
GDNFP39905 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.45□□□□□ -1.7
GDNFP39905 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.45□□□□□ -1.7
GDNFP39905 MYL8P-204ENST00000431574 518 ntBASIC4.45□□□□□ -1.7
GDNFP39905 RPL23AP33-201ENST00000442301 452 ntBASIC4.45□□□□□ -1.7
GDNFP39905 AC023141.9-201ENST00000458734 412 ntBASIC4.45□□□□□ -1.7
GDNFP39905 RN7SL717P-201ENST00000478343 297 ntBASIC4.45□□□□□ -1.7
GDNFP39905 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.45□□□□□ -1.7
GDNFP39905 NIP7P2-201ENST00000485801 544 ntBASIC4.45□□□□□ -1.7
GDNFP39905 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.45□□□□□ -1.7
GDNFP39905 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.45□□□□□ -1.7
GDNFP39905 AC005798.1-201ENST00000513715 387 ntBASIC4.45□□□□□ -1.7
GDNFP39905 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.45□□□□□ -1.7
GDNFP39905 Y_RNA.687-201ENST00000516558 91 ntBASIC4.45□□□□□ -1.7
GDNFP39905 OR10G5P-201ENST00000532733 358 ntBASIC4.45□□□□□ -1.7
GDNFP39905 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.45□□□□□ -1.7
GDNFP39905 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.45□□□□□ -1.7
GDNFP39905 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.45□□□□□ -1.7
GDNFP39905 AC067852.3-201ENST00000589177 561 ntBASIC4.45□□□□□ -1.7
GDNFP39905 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.45□□□□□ -1.7
GDNFP39905 RPS29P30-201ENST00000600975 111 ntBASIC4.45□□□□□ -1.7
GDNFP39905 AL034351.1-201ENST00000605288 668 ntBASIC4.45□□□□□ -1.7
GDNFP39905 AL160281.1-201ENST00000605307 311 ntBASIC4.45□□□□□ -1.7
GDNFP39905 MIR4302-201ENST00000638058 60 ntBASIC4.45□□□□□ -1.7
GDNFP39905 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms