Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 MTCO1P6-201ENST00000481192 1384 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 Y_RNA.224-201ENST00000364308 111 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 RNU6-1226P-201ENST00000384317 107 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 SSXP10-201ENST00000402595 565 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AC004965.1-201ENST00000413033 213 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.28□□□□□ -2.04
COL18A1P39060 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.28□□□□□ -2.04
COL18A1P39060 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.28□□□□□ -2.04
COL18A1P39060 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.28□□□□□ -2.04
COL18A1P39060 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.28□□□□□ -2.04
COL18A1P39060 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.28□□□□□ -2.04
COL18A1P39060 AC093392.2-201ENST00000450682 337 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 SNRPFP4-201ENST00000456366 242 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.28□□□□□ -2.04
COL18A1P39060 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.28□□□□□ -2.04
COL18A1P39060 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.28□□□□□ -2.04
COL18A1P39060 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.28□□□□□ -2.04
COL18A1P39060 AC012254.4-201ENST00000588843 273 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AL121917.1-203ENST00000605534 577 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 AC020923.1-201ENST00000624021 917 ntBASIC2.28□□□□□ -2.04
COL18A1P39060 ZNF734P-201ENST00000419494 1534 ntBASIC2.28□□□□□ -2.05
COL18A1P39060 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COL18A1P39060 RNY1P14-201ENST00000384426 108 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 RNU6-77P-201ENST00000410554 91 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 HMGB1P27-201ENST00000431429 603 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 AL034418.1-201ENST00000448675 860 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.27□□□□□ -2.05
COL18A1P39060 SSXP4-201ENST00000451349 245 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 snoU13.3-201ENST00000459441 104 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 AC104472.2-201ENST00000469035 601 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COL18A1P39060 AP004371.1-201ENST00000525240 214 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 AC004217.3-201ENST00000551552 878 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
COL18A1P39060 SNORA4-201ENST00000584302 138 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.27□□□□□ -2.05
COL18A1P39060 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COL18A1P39060 AC104307.1-201ENST00000616142 196 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 AL163051.2-201ENST00000618976 735 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 AL118508.4-201ENST00000624142 1176 ntBASIC2.27□□□□□ -2.05
COL18A1P39060 RNU6-1005P-201ENST00000384519 107 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 RNU6-441P-201ENST00000384545 106 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 MTND3P20-201ENST00000407663 186 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.26□□□□□ -2.05
COL18A1P39060 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.26□□□□□ -2.05
COL18A1P39060 RPS24P6-201ENST00000452670 400 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 AC104308.1-201ENST00000454621 333 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 USP9YP10-201ENST00000454868 628 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 AMD1P1-201ENST00000457220 922 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 RPL23AP55-201ENST00000498163 452 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.26□□□□□ -2.05
COL18A1P39060 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.26□□□□□ -2.05
COL18A1P39060 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
COL18A1P39060 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.26□□□□□ -2.05
COL18A1P39060 AC074051.3-201ENST00000570238 358 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.26□□□□□ -2.05
COL18A1P39060 KATNBL1P5-201ENST00000605015 517 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 MIR502-201ENST00000606349 86 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 AC106730.3-201ENST00000624568 641 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
COL18A1P39060 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
COL18A1P39060 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL18A1P39060 RNA5SP138-201ENST00000365098 114 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL18A1P39060 RPS3AP9-201ENST00000417027 792 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 PAICSP7-201ENST00000419829 962 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.26□□□□□ -2.05
COL18A1P39060 AC002542.1-201ENST00000440683 193 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 AL691517.1-201ENST00000440833 1235 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 RAB11AP1-201ENST00000442978 646 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.26□□□□□ -2.05
COL18A1P39060 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL18A1P39060 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.26□□□□□ -2.05
COL18A1P39060 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.26□□□□□ -2.05
COL18A1P39060 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.26□□□□□ -2.05
COL18A1P39060 AC089999.1-201ENST00000460336 374 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.26□□□□□ -2.05
COL18A1P39060 RPS27P23-201ENST00000487608 251 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL18A1P39060 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.26□□□□□ -2.05
COL18A1P39060 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.26□□□□□ -2.05
COL18A1P39060 AC104581.2-201ENST00000572227 430 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 BNIP3P4-201ENST00000604946 565 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 HSPE1P14-201ENST00000605812 302 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 AC012360.2-201ENST00000609349 391 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 uc_338.5-201ENST00000611839 155 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 RMST_10.1-201ENST00000616309 154 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 AC006963.1-201ENST00000624003 1052 ntBASIC2.26□□□□□ -2.05
COL18A1P39060 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.25□□□□□ -2.05
COL18A1P39060 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
COL18A1P39060 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL18A1P39060 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL18A1P39060 RNU6-650P-201ENST00000365658 111 ntBASIC2.25□□□□□ -2.05
COL18A1P39060 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.25□□□□□ -2.05
COL18A1P39060 DEFB109C-201ENST00000382575 264 ntBASIC2.25□□□□□ -2.05
COL18A1P39060 DEFB109B-201ENST00000382656 264 ntBASIC2.25□□□□□ -2.05
COL18A1P39060 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.25□□□□□ -2.05
COL18A1P39060 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms