Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.56□□□□□ -2
BRCA1P38398 AL512637.2-201ENST00000431287 1256 ntBASIC2.56□□□□□ -2
BRCA1P38398 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.56□□□□□ -2
BRCA1P38398 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.56□□□□□ -2
BRCA1P38398 AC009961.3-201ENST00000449832 765 ntBASIC2.56□□□□□ -2
BRCA1P38398 AC089999.1-201ENST00000460336 374 ntBASIC2.56□□□□□ -2
BRCA1P38398 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.56□□□□□ -2
BRCA1P38398 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.56□□□□□ -2
BRCA1P38398 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.56□□□□□ -2
BRCA1P38398 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.56□□□□□ -2
BRCA1P38398 AL669831.4-202ENST00000590817 238 ntBASIC2.56□□□□□ -2
BRCA1P38398 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.56□□□□□ -2
BRCA1P38398 AC025588.3-201ENST00000604182 274 ntBASIC2.56□□□□□ -2
BRCA1P38398 AC124016.2-201ENST00000610058 665 ntBASIC2.56□□□□□ -2
BRCA1P38398 AL137847.3-201ENST00000611521 109 ntBASIC2.56□□□□□ -2
BRCA1P38398 AC091953.2-201ENST00000623979 160 ntBASIC2.56□□□□□ -2
BRCA1P38398 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
BRCA1P38398 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
BRCA1P38398 GDI2P1-201ENST00000429312 1336 ntBASIC2.55□□□□□ -2
BRCA1P38398 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
BRCA1P38398 SNORD82-201ENST00000365530 70 ntBASIC2.55□□□□□ -2
BRCA1P38398 U6.112-201ENST00000384129 70 ntBASIC2.55□□□□□ -2
BRCA1P38398 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.55□□□□□ -2
BRCA1P38398 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.55□□□□□ -2
BRCA1P38398 NEK4P1-201ENST00000433383 879 ntBASIC2.55□□□□□ -2
BRCA1P38398 AL158053.1-201ENST00000441503 453 ntBASIC2.55□□□□□ -2
BRCA1P38398 TAF9P1-201ENST00000445421 515 ntBASIC2.55□□□□□ -2
BRCA1P38398 AL445669.2-201ENST00000454425 421 ntBASIC2.55□□□□□ -2
BRCA1P38398 TAF9P2-201ENST00000454958 515 ntBASIC2.55□□□□□ -2
BRCA1P38398 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.55□□□□□ -2
BRCA1P38398 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.55□□□□□ -2
BRCA1P38398 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.55□□□□□ -2
BRCA1P38398 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.55□□□□□ -2
BRCA1P38398 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.55□□□□□ -2
BRCA1P38398 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.55□□□□□ -2
BRCA1P38398 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.55□□□□□ -2
BRCA1P38398 DNAJC19P9-201ENST00000555084 351 ntBASIC2.55□□□□□ -2
BRCA1P38398 AMZ2P1-203ENST00000565833 850 ntBASIC2.55□□□□□ -2
BRCA1P38398 AC023824.3-201ENST00000569003 562 ntBASIC2.55□□□□□ -2
BRCA1P38398 MIR4255-201ENST00000579351 72 ntBASIC2.55□□□□□ -2
BRCA1P38398 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.55□□□□□ -2
BRCA1P38398 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.55□□□□□ -2
BRCA1P38398 AL035411.2-201ENST00000604022 421 ntBASIC2.55□□□□□ -2
BRCA1P38398 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.55□□□□□ -2
BRCA1P38398 AL512283.1-201ENST00000606756 1384 ntBASIC2.55□□□□□ -2
BRCA1P38398 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
BRCA1P38398 AC010680.1-201ENST00000590024 3590 ntBASIC2.55□□□□□ -2
BRCA1P38398 MTND5P7-201ENST00000413558 1798 ntBASIC2.54□□□□□ -2
BRCA1P38398 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.54□□□□□ -2
BRCA1P38398 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.54□□□□□ -2
BRCA1P38398 OR1L1-202ENST00000373686 1083 ntBASIC2.54□□□□□ -2
BRCA1P38398 SNORD51-201ENST00000384320 80 ntBASIC2.54□□□□□ -2
BRCA1P38398 RNU6-1197P-201ENST00000391183 107 ntBASIC2.54□□□□□ -2
BRCA1P38398 FCF1P2-201ENST00000415284 583 ntBASIC2.54□□□□□ -2
BRCA1P38398 TRIAP1P1-201ENST00000427062 225 ntBASIC2.54□□□□□ -2
BRCA1P38398 CR769767.1-201ENST00000436337 346 ntBASIC2.54□□□□□ -2
BRCA1P38398 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.54□□□□□ -2
BRCA1P38398 HSPE1P28-201ENST00000443139 211 ntBASIC2.54□□□□□ -2
BRCA1P38398 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.54□□□□□ -2
BRCA1P38398 GXYLT1P1-201ENST00000446657 490 ntBASIC2.54□□□□□ -2
BRCA1P38398 USP9YP34-201ENST00000453983 808 ntBASIC2.54□□□□□ -2
BRCA1P38398 AC104308.1-201ENST00000454621 333 ntBASIC2.54□□□□□ -2
BRCA1P38398 AC092798.1-201ENST00000458542 409 ntBASIC2.54□□□□□ -2
BRCA1P38398 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.54□□□□□ -2
BRCA1P38398 MIR3912-201ENST00000577566 105 ntBASIC2.54□□□□□ -2
BRCA1P38398 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.54□□□□□ -2
BRCA1P38398 AL670379.6-201ENST00000603753 252 ntBASIC2.54□□□□□ -2
BRCA1P38398 AL670379.11-201ENST00000604059 253 ntBASIC2.54□□□□□ -2
BRCA1P38398 AL670379.10-201ENST00000604330 253 ntBASIC2.54□□□□□ -2
BRCA1P38398 AC008162.1-201ENST00000604718 254 ntBASIC2.54□□□□□ -2
BRCA1P38398 AL670379.1-201ENST00000604752 252 ntBASIC2.54□□□□□ -2
BRCA1P38398 AL670379.2-201ENST00000604983 252 ntBASIC2.54□□□□□ -2
BRCA1P38398 AL670379.5-201ENST00000605253 252 ntBASIC2.54□□□□□ -2
BRCA1P38398 AL670379.4-201ENST00000605279 254 ntBASIC2.54□□□□□ -2
BRCA1P38398 AL670379.12-201ENST00000605291 253 ntBASIC2.54□□□□□ -2
BRCA1P38398 AL670379.8-201ENST00000605353 252 ntBASIC2.54□□□□□ -2
BRCA1P38398 AL670379.9-201ENST00000605428 253 ntBASIC2.54□□□□□ -2
BRCA1P38398 AC008962.1-201ENST00000605729 304 ntBASIC2.54□□□□□ -2
BRCA1P38398 AL670379.7-201ENST00000605823 252 ntBASIC2.54□□□□□ -2
BRCA1P38398 AL583856.2-201ENST00000606298 543 ntBASIC2.54□□□□□ -2
BRCA1P38398 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.54□□□□□ -2
BRCA1P38398 AC009318.4-201ENST00000620496 486 ntBASIC2.54□□□□□ -2
BRCA1P38398 AL157770.1-201ENST00000623049 439 ntBASIC2.54□□□□□ -2
BRCA1P38398 AP006248.3-201ENST00000623580 594 ntBASIC2.54□□□□□ -2
BRCA1P38398 SNORA50A-202ENST00000629536 136 ntBASIC2.54□□□□□ -2
BRCA1P38398 MTND2P41-201ENST00000637599 773 ntBASIC2.54□□□□□ -2
BRCA1P38398 U6.101-201ENST00000637707 76 ntBASIC2.54□□□□□ -2
BRCA1P38398 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
BRCA1P38398 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.54□□□□□ -2
BRCA1P38398 RNU6-582P-201ENST00000362989 107 ntBASIC2.54□□□□□ -2
BRCA1P38398 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
BRCA1P38398 RNU6-549P-201ENST00000384433 107 ntBASIC2.54□□□□□ -2
BRCA1P38398 SAR1AP2-201ENST00000392696 594 ntBASIC2.54□□□□□ -2
BRCA1P38398 AP002784.2-201ENST00000397300 549 ntBASIC2.54□□□□□ -2
BRCA1P38398 RNU2-15P-201ENST00000410692 191 ntBASIC2.54□□□□□ -2
BRCA1P38398 MTCO3P12-201ENST00000416718 547 ntBASIC2.54□□□□□ -2
BRCA1P38398 SSXP9-201ENST00000417503 292 ntBASIC2.54□□□□□ -2
BRCA1P38398 TOMM22P1-201ENST00000418578 312 ntBASIC2.54□□□□□ -2
BRCA1P38398 TMEM167AP1-201ENST00000423409 219 ntBASIC2.54□□□□□ -2
BRCA1P38398 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms