Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.05□□□□□ -2.08
COL5A3P25940 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A3P25940 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A3P25940 AC027104.1-201ENST00000563702 681 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 ZNF92P2-201ENST00000600543 1059 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AP003117.1-201ENST00000602771 554 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC005776.1-201ENST00000603164 290 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 APOOP1-201ENST00000604695 592 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC019159.1-201ENST00000605094 187 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC004775.1-201ENST00000607389 753 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A3P25940 AL512598.1-201ENST00000610158 273 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC105429.2-201ENST00000610567 517 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AL445493.3-201ENST00000619568 477 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
COL5A3P25940 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL5A3P25940 SNORD115-48-201ENST00000364764 76 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL5A3P25940 HMGB1P10-201ENST00000395823 563 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A3P25940 XKRYP4-201ENST00000414395 483 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A3P25940 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A3P25940 RPL23AP33-201ENST00000442301 452 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 AC092685.1-201ENST00000447960 1243 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A3P25940 XKRYP5-201ENST00000449659 483 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.04□□□□□ -2.08
COL5A3P25940 AC146507.1-201ENST00000468335 354 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 AC108734.3-201ENST00000481241 1165 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 RPL30P11-201ENST00000495304 339 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 RPL21P131-201ENST00000497298 483 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 AC025459.1-201ENST00000504072 156 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 AC133963.2-201ENST00000513686 578 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 RNA5SP82-201ENST00000516707 92 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 RNU4-60P-201ENST00000517239 135 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.04□□□□□ -2.08
COL5A3P25940 OSBPL9P3-201ENST00000534523 595 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 AC092451.2-201ENST00000538746 658 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A3P25940 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.04□□□□□ -2.08
COL5A3P25940 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.04□□□□□ -2.08
COL5A3P25940 AC079148.1-201ENST00000565944 819 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 AC135178.6-201ENST00000605314 398 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 U6.48-201ENST00000618523 106 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 AP006248.3-201ENST00000623580 594 ntBASIC2.04□□□□□ -2.08
COL5A3P25940 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.04□□□□□ -2.08
COL5A3P25940 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.04□□□□□ -2.08
COL5A3P25940 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL5A3P25940 Y_RNA.191-201ENST00000363972 113 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 RNU6-174P-201ENST00000410406 106 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 AC092638.1-201ENST00000411966 1275 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 PRELID3BP11-201ENST00000414230 479 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 AL357078.2-201ENST00000416486 427 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.03□□□□□ -2.08
COL5A3P25940 MTCO3P4-201ENST00000419236 787 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 ARL2BPP3-201ENST00000421226 480 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.03□□□□□ -2.08
COL5A3P25940 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
COL5A3P25940 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.03□□□□□ -2.08
COL5A3P25940 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.03□□□□□ -2.08
COL5A3P25940 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.03□□□□□ -2.08
COL5A3P25940 RPL23AP55-201ENST00000498163 452 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.03□□□□□ -2.08
COL5A3P25940 AC093770.1-201ENST00000511559 571 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.03□□□□□ -2.08
COL5A3P25940 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.03□□□□□ -2.08
COL5A3P25940 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
COL5A3P25940 AC069304.3-201ENST00000603938 1084 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
COL5A3P25940 AL512506.1-201ENST00000613918 449 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 AC090617.9-201ENST00000623751 147 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 MIR4496-201ENST00000635896 61 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL5A3P25940 AL157700.1-201ENST00000561973 1432 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL5A3P25940 MAPK10-266ENST00000641066 6555 ntBASIC2.03□□□□□ -2.08
COL5A3P25940 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
COL5A3P25940 RNU6-60P-201ENST00000364792 103 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 RNU6-452P-201ENST00000384406 107 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 MIR153-1-201ENST00000384914 90 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 PAICSP7-201ENST00000419829 962 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 HSPE1P1-201ENST00000421494 318 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.03□□□□□ -2.09
COL5A3P25940 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.03□□□□□ -2.09
COL5A3P25940 AC023347.2-201ENST00000433994 462 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 HMGN2P21-201ENST00000447764 270 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 TPT1P14-201ENST00000448018 505 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 AL137159.1-201ENST00000452808 512 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 AC090515.1-201ENST00000465295 476 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 AC107398.1-201ENST00000486904 505 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.03□□□□□ -2.09
COL5A3P25940 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.03□□□□□ -2.09
COL5A3P25940 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.03□□□□□ -2.09
COL5A3P25940 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.03□□□□□ -2.09
COL5A3P25940 AC015720.1-201ENST00000565251 277 ntBASIC2.03□□□□□ -2.09
COL5A3P25940 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.09
COL5A3P25940 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.03□□□□□ -2.09
COL5A3P25940 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms