Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ERCC3P19447 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ERCC3P19447 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ERCC3P19447 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.33□□□□□ -1.56
ERCC3P19447 Y_RNA.126-201ENST00000363382 111 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 Y_RNA.166-201ENST00000363730 102 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 MIR659-201ENST00000384963 97 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 AC080125.1-201ENST00000414888 684 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.33□□□□□ -1.56
ERCC3P19447 AL451062.2-201ENST00000427515 271 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.33□□□□□ -1.56
ERCC3P19447 RPS15AP27-201ENST00000449183 343 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 AL445433.1-201ENST00000457507 257 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 RPL21P126-201ENST00000470049 478 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.33□□□□□ -1.56
ERCC3P19447 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.33□□□□□ -1.56
ERCC3P19447 FTH1P9-201ENST00000513251 355 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 RNU6-1256P-201ENST00000516539 103 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 RNU6-143P-201ENST00000516942 93 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 IGLVIV-65-201ENST00000517313 360 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ERCC3P19447 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.33□□□□□ -1.56
ERCC3P19447 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.33□□□□□ -1.56
ERCC3P19447 ATP1B3P1-201ENST00000605365 821 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 CTHRC1P1-201ENST00000605383 469 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 AC009570.1-201ENST00000609599 745 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 U2.17-201ENST00000611454 95 ntBASIC5.33□□□□□ -1.56
ERCC3P19447 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.33□□□□□ -1.56
ERCC3P19447 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
ERCC3P19447 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.33□□□□□ -1.56
ERCC3P19447 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC3P19447 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ERCC3P19447 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC3P19447 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.32□□□□□ -1.56
ERCC3P19447 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.32□□□□□ -1.56
ERCC3P19447 UBE2L2-201ENST00000254302 429 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 SNORA51.2-201ENST00000364595 132 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC3P19447 RNU6-831P-201ENST00000384548 107 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 RNU6-1127P-201ENST00000384580 107 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 Z98745.1-201ENST00000402553 494 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 POLHP1-201ENST00000411806 470 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.32□□□□□ -1.56
ERCC3P19447 RPL17P36-201ENST00000420302 549 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 AL356387.2-201ENST00000422272 243 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.32□□□□□ -1.56
ERCC3P19447 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.32□□□□□ -1.56
ERCC3P19447 TXNP1-201ENST00000441872 371 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 AMD1P1-201ENST00000457220 922 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 CYCSP34-201ENST00000458172 304 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 RPL31P60-201ENST00000478450 367 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 MTCO3P9-201ENST00000506989 781 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 AC015795.1-201ENST00000513669 327 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.32□□□□□ -1.56
ERCC3P19447 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.32□□□□□ -1.56
ERCC3P19447 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.32□□□□□ -1.56
ERCC3P19447 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.32□□□□□ -1.56
ERCC3P19447 MIR8069-1-201ENST00000616627 86 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 MIR8069-2-201ENST00000621412 86 ntBASIC5.32□□□□□ -1.56
ERCC3P19447 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.32□□□□□ -1.56
ERCC3P19447 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC3P19447 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
ERCC3P19447 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC3P19447 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC3P19447 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC3P19447 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
ERCC3P19447 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC3P19447 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.31□□□□□ -1.56
ERCC3P19447 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.31□□□□□ -1.56
ERCC3P19447 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC3P19447 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
ERCC3P19447 AL133243.3-201ENST00000617415 3004 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
ERCC3P19447 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.31□□□□□ -1.56
ERCC3P19447 RNU6-512P-201ENST00000364438 103 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 RNU6-522P-201ENST00000364497 107 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 RNU6-393P-201ENST00000384475 107 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 Y_RNA.530-201ENST00000384587 101 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 RPS4XP7-201ENST00000406274 780 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 RNA5SP146-201ENST00000410743 123 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 E2F6P2-201ENST00000420708 748 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 HSPE1P1-201ENST00000421494 318 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 RPL27AP8-201ENST00000424277 446 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 AC007919.1-201ENST00000429380 217 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 AL356867.1-201ENST00000429623 299 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 SCARNA10-201ENST00000459255 330 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 RNU6-329P-201ENST00000459618 107 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.31□□□□□ -1.56
ERCC3P19447 RPS15AP34-201ENST00000487776 387 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.31□□□□□ -1.56
ERCC3P19447 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.31□□□□□ -1.56
ERCC3P19447 FAM206BP-201ENST00000510179 541 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 AC105029.1-201ENST00000520250 669 ntBASIC5.31□□□□□ -1.56
ERCC3P19447 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.31□□□□□ -1.56
ERCC3P19447 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC3P19447 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.31□□□□□ -1.56
ERCC3P19447 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms