Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 THAP5P1-201ENST00000439089 262 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 RPL21P2-201ENST00000440049 481 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.84□□□□□ -1.95
XRCC1P18887 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.84□□□□□ -1.95
XRCC1P18887 RNA5SP310-201ENST00000459084 116 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.84□□□□□ -1.95
XRCC1P18887 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.84□□□□□ -1.95
XRCC1P18887 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.84□□□□□ -1.95
XRCC1P18887 AC105185.1-201ENST00000518705 535 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AP000857.1-201ENST00000532151 543 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.84□□□□□ -1.95
XRCC1P18887 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.84□□□□□ -1.95
XRCC1P18887 AC034105.3-201ENST00000565294 442 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.84□□□□□ -1.95
XRCC1P18887 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.84□□□□□ -1.95
XRCC1P18887 AC105224.1-201ENST00000587055 421 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.84□□□□□ -1.95
XRCC1P18887 AP001429.1-201ENST00000602568 530 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AL391001.1-201ENST00000602747 715 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.84□□□□□ -1.95
XRCC1P18887 AC015871.2-201ENST00000603605 948 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AL033523.1-201ENST00000605153 153 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AL133507.1-201ENST00000605269 557 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AL158042.1-201ENST00000605338 460 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AC131902.3-201ENST00000611767 581 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 MIR7106-201ENST00000612419 65 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AP000484.1-201ENST00000620067 1252 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AC091046.2-201ENST00000620775 665 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
XRCC1P18887 AC079228.1-201ENST00000624774 1049 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 AL161431.1-201ENST00000618966 4205 ntBASIC2.84□□□□□ -1.95
XRCC1P18887 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
XRCC1P18887 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
XRCC1P18887 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.83□□□□□ -1.96
XRCC1P18887 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
XRCC1P18887 RNU6-76P-201ENST00000384060 104 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 MIR513B-201ENST00000385136 84 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 MIR493-201ENST00000385254 89 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 RPS3AP24-201ENST00000407896 734 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.83□□□□□ -1.96
XRCC1P18887 TPMTP3-201ENST00000411928 735 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.83□□□□□ -1.96
XRCC1P18887 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.83□□□□□ -1.96
XRCC1P18887 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.83□□□□□ -1.96
XRCC1P18887 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.83□□□□□ -1.96
XRCC1P18887 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
XRCC1P18887 RPL26P6-201ENST00000440913 438 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
XRCC1P18887 AL135938.1-201ENST00000443141 297 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 MTND1P31-201ENST00000449206 961 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 AL162389.1-201ENST00000449233 177 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.83□□□□□ -1.96
XRCC1P18887 AL590639.1-201ENST00000456484 337 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 AC021382.1-201ENST00000483523 359 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 AC093281.2-201ENST00000510153 597 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.83□□□□□ -1.96
XRCC1P18887 RNU1-103P-201ENST00000516502 125 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 RNA5SP367-201ENST00000516557 118 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 RNU5A-4P-201ENST00000516588 111 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.83□□□□□ -1.96
XRCC1P18887 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.83□□□□□ -1.96
XRCC1P18887 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.83□□□□□ -1.96
XRCC1P18887 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.83□□□□□ -1.96
XRCC1P18887 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.83□□□□□ -1.96
XRCC1P18887 AC006504.3-201ENST00000586818 523 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 ELOCP29-201ENST00000588193 334 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 AL158211.4-201ENST00000606988 584 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 AL450472.3-201ENST00000615578 367 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 SCARNA15.3-201ENST00000626315 122 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 SCARNA4.1-201ENST00000628597 123 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.83□□□□□ -1.96
XRCC1P18887 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.83□□□□□ -1.96
XRCC1P18887 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
XRCC1P18887 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
XRCC1P18887 FAM35BP-202ENST00000497389 3337 ntBASIC2.83□□□□□ -1.96
XRCC1P18887 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
XRCC1P18887 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
XRCC1P18887 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
XRCC1P18887 FAM133CP-201ENST00000332869 704 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 RNU1-35P-201ENST00000362782 153 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 RNU6-157P-201ENST00000383957 107 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 RNU6-1207P-201ENST00000384343 107 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 RPS4XP3-201ENST00000398541 413 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 AL356421.1-201ENST00000403255 413 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 AL645937.1-202ENST00000421799 937 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 USP9YP36-201ENST00000424581 829 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 SAR1AP4-201ENST00000429225 591 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 TXNL1P1-201ENST00000429528 554 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 AC090774.1-201ENST00000435925 246 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 AC093156.1-201ENST00000440382 670 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 FGF7P5-201ENST00000441829 291 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.82□□□□□ -1.96
XRCC1P18887 RPL39P40-201ENST00000445481 146 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.82□□□□□ -1.96
XRCC1P18887 RPL23AP11-201ENST00000475260 469 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.82□□□□□ -1.96
XRCC1P18887 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.82□□□□□ -1.96
XRCC1P18887 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.82□□□□□ -1.96
XRCC1P18887 AC111000.2-201ENST00000507775 550 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms