Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN1P18031 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
PTPN1P18031 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN1P18031 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
PTPN1P18031 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PTPN1P18031 GABPAP-201ENST00000419271 1356 ntBASIC4.53□□□□□ -1.69
PTPN1P18031 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN1P18031 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PTPN1P18031 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPN1P18031 U3.12-201ENST00000364498 214 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 Y_RNA.530-201ENST00000384587 101 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 UBE2V1P2-201ENST00000397758 440 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 RNU4-78P-201ENST00000410940 126 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 BX323014.1-201ENST00000412876 237 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN1P18031 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPN1P18031 BEND7P1-201ENST00000422058 457 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN1P18031 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPN1P18031 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPN1P18031 NDUFA5P4-201ENST00000436704 385 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 ABCF2P2-201ENST00000450549 296 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN1P18031 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN1P18031 AC103987.1-201ENST00000473394 348 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN1P18031 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 RPL7P23-201ENST00000493874 747 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 MYL12AP1-201ENST00000518490 515 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN1P18031 MRPL49P2-201ENST00000521066 465 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN1P18031 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPN1P18031 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN1P18031 AL118558.2-201ENST00000556294 238 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN1P18031 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPN1P18031 AC008638.3-201ENST00000603341 463 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 AC092807.2-201ENST00000609367 243 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 SNX18P1Y-201ENST00000616231 511 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 MIR8059-201ENST00000620427 81 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPN1P18031 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN1P18031 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN1P18031 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN1P18031 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPN1P18031 DDX10P1-201ENST00000448545 1933 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PTPN1P18031 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN1P18031 AC116667.1-201ENST00000604855 2072 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PTPN1P18031 AC068254.2-201ENST00000623938 3577 ntBASIC4.52□□□□□ -1.69
PTPN1P18031 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN1P18031 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN1P18031 SCN1A-220ENST00000641603 12506 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN1P18031 MAPK10-304ENST00000641341 3984 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN1P18031 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN1P18031 API5P2-201ENST00000397055 1498 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN1P18031 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN1P18031 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN1P18031 Y_RNA.576-201ENST00000384781 102 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN1P18031 USP9YP20-201ENST00000419224 558 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 EIF4EP1-201ENST00000422311 642 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 PDSS1P1-201ENST00000422953 1114 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 MRPS18BP2-201ENST00000434310 759 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN1P18031 PRPS1P1-201ENST00000445305 876 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN1P18031 AL590399.6-201ENST00000446396 307 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 MTND4P19-201ENST00000446659 478 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN1P18031 AC104164.2-201ENST00000496953 495 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN1P18031 AC099522.1-202ENST00000514718 367 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 RNU6-1038P-201ENST00000516516 104 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN1P18031 AP005597.4-201ENST00000526762 229 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 AC109635.4-202ENST00000531666 412 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 HMGB3P26-201ENST00000560051 582 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN1P18031 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN1P18031 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN1P18031 TUG1_2.1-201ENST00000614234 87 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 SNHG22-203ENST00000617833 660 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 AC055839.1-201ENST00000634467 498 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 AL133243.3-201ENST00000617415 3004 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 MTCO1P24-201ENST00000515438 1558 ntBASIC4.51□□□□□ -1.69
PTPN1P18031 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN1P18031 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPN1P18031 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTPN1P18031 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PTPN1P18031 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
PTPN1P18031 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPN1P18031 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms