Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL1P09341 AC011330.2-201ENST00000621680 635 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 AC090772.4-201ENST00000623599 362 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL1P09341 AC091932.3-201ENST00000624223 323 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CXCL1P09341 AC080128.1-201ENST00000474389 1917 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CXCL1P09341 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CXCL1P09341 RNU6-7-201ENST00000364784 107 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 RNU6-8-201ENST00000365467 107 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 MIR221-201ENST00000385135 110 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 AL035405.1-201ENST00000400795 710 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 RPS7P9-201ENST00000414704 586 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL1P09341 AL590383.1-201ENST00000428602 75 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 AL356867.1-201ENST00000429623 299 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 RPL31P54-201ENST00000429803 370 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 AL512844.2-201ENST00000433990 593 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 ELOCP3-201ENST00000439303 348 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 OSTCP8-201ENST00000445117 448 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 AC044797.1-201ENST00000445744 679 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL1P09341 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL1P09341 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL1P09341 RNA5SP233-201ENST00000459153 113 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 OR4G11P-201ENST00000492842 939 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 RN7SL636P-201ENST00000497504 294 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL1P09341 RNU5F-8P-201ENST00000515941 111 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 SCARNA17.1-201ENST00000516211 143 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 SCARNA17.2-201ENST00000516334 143 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 SNORA31.23-201ENST00000517219 133 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.57□□□□□ -2.16
CXCL1P09341 ARL2BPP5-201ENST00000523141 481 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL1P09341 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL1P09341 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.57□□□□□ -2.16
CXCL1P09341 HSPE1P3-201ENST00000559254 309 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL1P09341 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.57□□□□□ -2.16
CXCL1P09341 MIR4319-201ENST00000577285 85 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 MIR1254-2-201ENST00000579553 63 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 AC013553.2-201ENST00000604244 589 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 AC021749.1-201ENST00000604322 607 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CXCL1P09341 SCARNA17.4-201ENST00000614296 143 ntBASIC1.57□□□□□ -2.16
CXCL1P09341 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.57□□□□□ -2.16
CXCL1P09341 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.57□□□□□ -2.16
CXCL1P09341 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
CXCL1P09341 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.56□□□□□ -2.16
CXCL1P09341 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.56□□□□□ -2.16
CXCL1P09341 SNORA51.6-201ENST00000384151 125 ntBASIC1.56□□□□□ -2.16
CXCL1P09341 OR51A3P-201ENST00000413596 924 ntBASIC1.56□□□□□ -2.16
CXCL1P09341 MTCYBP45-201ENST00000435243 565 ntBASIC1.56□□□□□ -2.16
CXCL1P09341 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.56□□□□□ -2.16
CXCL1P09341 AL109933.2-201ENST00000452651 260 ntBASIC1.56□□□□□ -2.16
CXCL1P09341 RFC5P1-201ENST00000454419 874 ntBASIC1.56□□□□□ -2.16
CXCL1P09341 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.56□□□□□ -2.16
CXCL1P09341 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.56□□□□□ -2.16
CXCL1P09341 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.56□□□□□ -2.16
CXCL1P09341 SUMO2P6-201ENST00000505273 288 ntBASIC1.56□□□□□ -2.16
CXCL1P09341 RNU7-193P-201ENST00000516723 65 ntBASIC1.56□□□□□ -2.16
CXCL1P09341 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.56□□□□□ -2.16
CXCL1P09341 SNRPGP18-201ENST00000553000 214 ntBASIC1.56□□□□□ -2.16
CXCL1P09341 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.56□□□□□ -2.16
CXCL1P09341 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.56□□□□□ -2.16
CXCL1P09341 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.56□□□□□ -2.16
CXCL1P09341 AC008749.1-201ENST00000597650 306 ntBASIC1.56□□□□□ -2.16
CXCL1P09341 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.56□□□□□ -2.16
CXCL1P09341 AL592148.2-201ENST00000612210 372 ntBASIC1.56□□□□□ -2.16
CXCL1P09341 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.56□□□□□ -2.16
CXCL1P09341 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CXCL1P09341 MIR135A2-201ENST00000384854 100 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 MIR525-201ENST00000384978 85 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 ATF1P1-201ENST00000406040 927 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 RNU2-43P-201ENST00000410306 190 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 RNU6-1328P-201ENST00000410938 106 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.55□□□□□ -2.16
CXCL1P09341 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.55□□□□□ -2.16
CXCL1P09341 BEND7P1-201ENST00000422058 457 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AL512637.2-201ENST00000431287 1256 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 ZNF965P-201ENST00000432501 817 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 MICF-203ENST00000432679 129 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC236972.1-201ENST00000433225 199 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.55□□□□□ -2.16
CXCL1P09341 Z80107.1-201ENST00000436830 412 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 CYCSP32-201ENST00000440548 321 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 RPL26P6-201ENST00000440913 438 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC016691.1-201ENST00000441321 413 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 RPL21P133-201ENST00000443666 476 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.55□□□□□ -2.16
CXCL1P09341 AC113420.1-201ENST00000507903 571 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC114786.4-201ENST00000508771 728 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC114797.1-201ENST00000514003 728 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC026801.2-201ENST00000515352 425 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 AC022447.1-201ENST00000515358 464 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 RNA5SP356-201ENST00000515972 94 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.55□□□□□ -2.16
CXCL1P09341 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms