Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 GXYLT1P1-201ENST00000446657 490 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 AL590664.1-201ENST00000448065 339 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 AC078857.1-201ENST00000469870 667 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 AC012181.1-201ENST00000479895 423 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.89□□□□□ -2.11
COL4A2P08572 AC084024.2-201ENST00000503480 791 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 AC118282.2-201ENST00000508739 374 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 MTCYBP37-201ENST00000510642 1133 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 MTCO3P44-201ENST00000510977 541 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 RNU6-250P-201ENST00000516958 103 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 snoZ278.1-201ENST00000517059 112 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.89□□□□□ -2.11
COL4A2P08572 AC023824.3-201ENST00000569003 562 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 MIR4448-201ENST00000584360 86 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 MIR4781-201ENST00000585250 76 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.89□□□□□ -2.11
COL4A2P08572 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
COL4A2P08572 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.89□□□□□ -2.11
COL4A2P08572 AC020923.1-201ENST00000624021 917 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 MTND4P34-201ENST00000572715 1371 ntBASIC1.89□□□□□ -2.11
COL4A2P08572 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL4A2P08572 RNU6-335P-201ENST00000364563 113 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 SNORA51.6-201ENST00000384151 125 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 AL357078.2-201ENST00000416486 427 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.88□□□□□ -2.11
COL4A2P08572 AL606495.1-201ENST00000422100 813 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A2P08572 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.88□□□□□ -2.11
COL4A2P08572 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL4A2P08572 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.88□□□□□ -2.11
COL4A2P08572 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.88□□□□□ -2.11
COL4A2P08572 KLRA1P-201ENST00000503499 986 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 NAMPTP2-201ENST00000505629 1115 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A2P08572 SNORA31.8-201ENST00000516327 108 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 AC087272.1-201ENST00000523624 533 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 AP004371.1-201ENST00000525240 214 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 SYF2P1-201ENST00000550658 413 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.88□□□□□ -2.11
COL4A2P08572 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A2P08572 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A2P08572 ZNF849P-201ENST00000594711 1566 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A2P08572 AC084824.5-201ENST00000612009 413 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 AL512506.2-201ENST00000624472 458 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 MFSD8-245ENST00000641743 948 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A2P08572 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL4A2P08572 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL4A2P08572 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL4A2P08572 RNU6-792P-201ENST00000363490 107 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 Y_RNA.269-201ENST00000364685 89 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 RNA5SP160-201ENST00000364866 120 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 MIR16-1-201ENST00000385271 89 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
COL4A2P08572 AP1B1P2-201ENST00000416196 106 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 RPL23AP76-201ENST00000441860 458 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.88□□□□□ -2.11
COL4A2P08572 AC104073.1-201ENST00000451988 151 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 RPS24P6-201ENST00000452670 400 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.88□□□□□ -2.11
COL4A2P08572 AC008628.1-201ENST00000508663 265 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.88□□□□□ -2.11
COL4A2P08572 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.88□□□□□ -2.11
COL4A2P08572 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.88□□□□□ -2.11
COL4A2P08572 IGJP1-201ENST00000522682 475 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A2P08572 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.88□□□□□ -2.11
COL4A2P08572 LSM6P2-201ENST00000552208 177 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 MIR4789-201ENST00000577469 82 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 SNORD39.3-201ENST00000584451 71 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.88□□□□□ -2.11
COL4A2P08572 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A2P08572 AL356280.1-201ENST00000603614 379 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A2P08572 AP005229.2-201ENST00000609980 697 ntBASIC1.88□□□□□ -2.11
COL4A2P08572 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.88□□□□□ -2.11
COL4A2P08572 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
COL4A2P08572 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
COL4A2P08572 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
COL4A2P08572 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL4A2P08572 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
COL4A2P08572 RNU6-730P-201ENST00000383954 104 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 MIR591-201ENST00000385290 95 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 SNORA67.5-201ENST00000391036 107 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AL021407.1-201ENST00000404531 386 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A2P08572 RPS3AP9-201ENST00000417027 792 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A2P08572 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A2P08572 AC005345.1-201ENST00000431868 217 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A2P08572 HIGD1AP11-201ENST00000438361 280 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AC124916.1-201ENST00000444020 547 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.87□□□□□ -2.11
COL4A2P08572 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A2P08572 MTCO3P2-201ENST00000457365 171 ntBASIC1.87□□□□□ -2.11
COL4A2P08572 AC025033.1-201ENST00000463883 194 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms