Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.27□□□□□ -1.89
COL2A1P02458 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.27□□□□□ -1.89
COL2A1P02458 SEPT7P9-203ENST00000604116 343 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 AC106028.5-201ENST00000610332 395 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 AL589743.7-201ENST00000612637 233 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
COL2A1P02458 AC006111.3-201ENST00000622137 383 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL2A1P02458 TEX21P-201ENST00000447107 1476 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
COL2A1P02458 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL2A1P02458 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL2A1P02458 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.26□□□□□ -1.89
COL2A1P02458 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.26□□□□□ -1.89
COL2A1P02458 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.26□□□□□ -1.89
COL2A1P02458 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.26□□□□□ -1.89
COL2A1P02458 AC109315.1-201ENST00000584143 1347 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 AC004972.1-201ENST00000623934 2209 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL2A1P02458 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
COL2A1P02458 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.26□□□□□ -1.89
COL2A1P02458 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
COL2A1P02458 Y_RNA.238-201ENST00000364441 102 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 Y_RNA.256-201ENST00000364594 104 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 RN7SKP226-201ENST00000364912 300 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.26□□□□□ -1.89
COL2A1P02458 MIR525-201ENST00000384978 85 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 MIR764-201ENST00000390811 85 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 RNU2-52P-201ENST00000410680 190 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.26□□□□□ -1.89
COL2A1P02458 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.26□□□□□ -1.89
COL2A1P02458 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.26□□□□□ -1.89
COL2A1P02458 AC007435.1-201ENST00000421086 415 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.26□□□□□ -1.89
COL2A1P02458 RPS20P5-201ENST00000434808 360 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 AL157827.1-201ENST00000447622 132 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 AC104058.1-201ENST00000448028 297 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 MTND5P20-201ENST00000448677 143 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 CALM1P2-201ENST00000452941 448 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.26□□□□□ -1.89
COL2A1P02458 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
COL2A1P02458 AC021205.1-201ENST00000468797 348 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 RPL31P58-201ENST00000469001 379 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.26□□□□□ -1.89
COL2A1P02458 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.26□□□□□ -1.89
COL2A1P02458 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.26□□□□□ -1.89
COL2A1P02458 MTATP6P22-201ENST00000507369 598 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL2A1P02458 DEFB108A-201ENST00000530110 222 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.26□□□□□ -1.89
COL2A1P02458 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
COL2A1P02458 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.26□□□□□ -1.89
COL2A1P02458 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.26□□□□□ -1.89
COL2A1P02458 MIR4644-201ENST00000579929 84 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 AP001330.5-201ENST00000607176 411 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 AC090115.4-201ENST00000609970 188 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 AC131238.1-201ENST00000617135 328 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL2A1P02458 AL359697.1-201ENST00000624879 587 ntBASIC3.26□□□□□ -1.89
COL2A1P02458 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.26□□□□□ -1.89
COL2A1P02458 AC092079.1-201ENST00000558620 1985 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 ZNF658B-202ENST00000615961 3375 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
COL2A1P02458 Y_RNA.18-201ENST00000362461 102 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 Y_RNA.372-201ENST00000365599 102 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 RNU6-549P-201ENST00000384433 107 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
COL2A1P02458 NCSTNP1-201ENST00000406229 144 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AL139098.1-201ENST00000407291 389 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 MIR1277-201ENST00000408536 78 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL2A1P02458 RN7SKP192-201ENST00000411291 327 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.25□□□□□ -1.89
COL2A1P02458 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.25□□□□□ -1.89
COL2A1P02458 Z99497.1-201ENST00000421282 135 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 MTCO3P1-205ENST00000422088 832 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.25□□□□□ -1.89
COL2A1P02458 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.25□□□□□ -1.89
COL2A1P02458 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.25□□□□□ -1.89
COL2A1P02458 RPS25P9-201ENST00000435591 252 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 HMGB1P31-201ENST00000437242 427 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.25□□□□□ -1.89
COL2A1P02458 AC023512.1-201ENST00000444513 499 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 PAXBP1P1-201ENST00000449315 447 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 RPL23AP35-201ENST00000451906 501 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.25□□□□□ -1.89
COL2A1P02458 HMGN1P10-201ENST00000474557 553 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 HMGB1P36-201ENST00000487709 576 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AC106872.2-201ENST00000494303 480 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.25□□□□□ -1.89
COL2A1P02458 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.25□□□□□ -1.89
COL2A1P02458 TXNP6-201ENST00000510190 310 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.25□□□□□ -1.89
COL2A1P02458 AC109445.1-201ENST00000512356 383 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL2A1P02458 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.25□□□□□ -1.89
COL2A1P02458 RN7SKP244-201ENST00000516513 307 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.25□□□□□ -1.89
COL2A1P02458 AC068657.1-201ENST00000520807 306 ntBASIC3.25□□□□□ -1.89
COL2A1P02458 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms