Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.01□□□□□ -2.09
CPSF4O95639 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.01□□□□□ -2.09
CPSF4O95639 AC010625.1-201ENST00000511296 403 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.01□□□□□ -2.09
CPSF4O95639 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.01□□□□□ -2.09
CPSF4O95639 AC087808.1-201ENST00000520501 361 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 AC103783.1-201ENST00000520506 373 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 AP003122.3-201ENST00000526316 255 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.01□□□□□ -2.09
CPSF4O95639 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.01□□□□□ -2.09
CPSF4O95639 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.01□□□□□ -2.09
CPSF4O95639 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.01□□□□□ -2.09
CPSF4O95639 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.01□□□□□ -2.09
CPSF4O95639 BNIP3P24-201ENST00000593398 557 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 AC245036.5-201ENST00000596330 847 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 AC106791.2-201ENST00000604680 391 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CPSF4O95639 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.01□□□□□ -2.09
CPSF4O95639 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CPSF4O95639 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
CPSF4O95639 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2□□□□□ -2.09
CPSF4O95639 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2□□□□□ -2.09
CPSF4O95639 SNRPEP3-201ENST00000338402 276 ntBASIC2□□□□□ -2.09
CPSF4O95639 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2□□□□□ -2.09
CPSF4O95639 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
CPSF4O95639 NDUFB4P4-201ENST00000404822 243 ntBASIC2□□□□□ -2.09
CPSF4O95639 AL161449.1-201ENST00000414531 1199 ntBASIC2□□□□□ -2.09
CPSF4O95639 AC092427.1-201ENST00000439177 601 ntBASIC2□□□□□ -2.09
CPSF4O95639 UBBP3-201ENST00000445497 241 ntBASIC2□□□□□ -2.09
CPSF4O95639 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2□□□□□ -2.09
CPSF4O95639 RPL39P6-201ENST00000448289 150 ntBASIC2□□□□□ -2.09
CPSF4O95639 RFC5P1-201ENST00000454419 874 ntBASIC2□□□□□ -2.09
CPSF4O95639 Z82190.1-201ENST00000454534 490 ntBASIC2□□□□□ -2.09
CPSF4O95639 PNPLA4P1-201ENST00000458328 305 ntBASIC2□□□□□ -2.09
CPSF4O95639 RNU6-717P-201ENST00000459076 104 ntBASIC2□□□□□ -2.09
CPSF4O95639 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2□□□□□ -2.09
CPSF4O95639 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2□□□□□ -2.09
CPSF4O95639 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2□□□□□ -2.09
CPSF4O95639 CBX3P3-201ENST00000508108 532 ntBASIC2□□□□□ -2.09
CPSF4O95639 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2□□□□□ -2.09
CPSF4O95639 SCARNA16.3-201ENST00000516595 184 ntBASIC2□□□□□ -2.09
CPSF4O95639 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2□□□□□ -2.09
CPSF4O95639 AC024224.1-201ENST00000538284 609 ntBASIC2□□□□□ -2.09
CPSF4O95639 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2□□□□□ -2.09
CPSF4O95639 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2□□□□□ -2.09
CPSF4O95639 AC125611.2-201ENST00000551907 647 ntBASIC2□□□□□ -2.09
CPSF4O95639 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2□□□□□ -2.09
CPSF4O95639 AADACP1-206ENST00000561502 1193 ntBASIC2□□□□□ -2.09
CPSF4O95639 MIR3162-201ENST00000581818 82 ntBASIC2□□□□□ -2.09
CPSF4O95639 AC011471.1-201ENST00000585766 187 ntBASIC2□□□□□ -2.09
CPSF4O95639 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
CPSF4O95639 AL606834.3-201ENST00000602615 496 ntBASIC2□□□□□ -2.09
CPSF4O95639 BNIP3P31-201ENST00000604515 566 ntBASIC2□□□□□ -2.09
CPSF4O95639 AC106900.2-201ENST00000604994 317 ntBASIC2□□□□□ -2.09
CPSF4O95639 AL121917.1-203ENST00000605534 577 ntBASIC2□□□□□ -2.09
CPSF4O95639 AC024060.1-201ENST00000607052 494 ntBASIC2□□□□□ -2.09
CPSF4O95639 AC005332.6-201ENST00000613178 446 ntBASIC2□□□□□ -2.09
CPSF4O95639 AL356585.4-201ENST00000623078 1229 ntBASIC2□□□□□ -2.09
CPSF4O95639 AC120349.2-201ENST00000625002 298 ntBASIC2□□□□□ -2.09
CPSF4O95639 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2□□□□□ -2.09
CPSF4O95639 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CPSF4O95639 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CPSF4O95639 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
CPSF4O95639 AC107982.1-201ENST00000507171 1300 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CPSF4O95639 RNU6-216P-201ENST00000363282 104 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 RNU5D-1-201ENST00000363299 116 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 RNU6-1155P-201ENST00000363554 107 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 snoZ40.1-201ENST00000364540 72 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CPSF4O95639 MIR144-201ENST00000384886 86 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 RNU6-1000P-201ENST00000391066 106 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 RPS4XP7-201ENST00000406274 780 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 SNORA11.4-201ENST00000408823 129 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 MIR1289-1-201ENST00000408836 144 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 RNU2-47P-201ENST00000410649 186 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.99□□□□□ -2.09
CPSF4O95639 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.99□□□□□ -2.09
CPSF4O95639 AC007435.1-201ENST00000421086 415 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 MTCO3P30-201ENST00000426425 670 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 GTF2IP3-201ENST00000433887 494 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 SDR42E1P3-201ENST00000438345 502 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 USP9YP22-201ENST00000438971 294 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 MTCYBP11-201ENST00000447254 1109 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.99□□□□□ -2.09
CPSF4O95639 AL589880.1-201ENST00000448271 287 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC005297.2-201ENST00000450430 606 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 RNA5SP310-201ENST00000459084 116 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 RPS15AP17-201ENST00000470598 390 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC069528.1-202ENST00000482888 637 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 MTCYBP16-201ENST00000509187 1129 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.99□□□□□ -2.09
CPSF4O95639 SNORA19.3-201ENST00000516165 130 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 RN7SKP31-201ENST00000516354 278 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.99□□□□□ -2.09
CPSF4O95639 OR5AK1P-201ENST00000524837 922 ntBASIC1.99□□□□□ -2.09
CPSF4O95639 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.99□□□□□ -2.09
CPSF4O95639 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.99□□□□□ -2.09
CPSF4O95639 SETP7-201ENST00000552169 453 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms